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opmE protein (Pseudomonas aeruginosa) - STRING interaction network
"opmE" - outer_NodT: efflux transporter, outer membrane factor in Pseudomonas aeruginosa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
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[Homology]
Score
opmEouter_NodT- efflux transporter, outer membrane factor (OMF) lipo, NodT family protein (491 aa)    
Predicted Functional Partners:
bepE1
2A0602- RND transporter, hydrophobe/amphiphile efflux-1 family protein (1053 aa)
 
  0.972
mexP
Resistance-nodulation-cell division (RND) efflux membrane fusion protein; RND_mfp- efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (385 aa)
 
 
  0.964
mexE
Resistance-nodulation-cell division (RND) Multidrug efflux membrane fusion protein MexE; RND_mfp- efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (414 aa)
 
 
  0.760
bepE
2A0602- RND transporter, hydrophobe/amphiphile efflux-1 family protein (1062 aa)
 
  0.754
mexB
annotation not available (1046 aa)
 
  0.751
DR97_5828
Uncharacterized protein; RND_mfp- efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (396 aa)
 
 
  0.736
acrA
Acriflavine resistance protein A; RND_mfp- efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (354 aa)
 
 
  0.731
acrD
2A0602- RND transporter, hydrophobe/amphiphile efflux-1 family protein (1045 aa)
 
  0.723
DR97_5466
RND_mfp- efflux transporter, RND family, MFP subunit (505 aa)
   
 
  0.714
mexA
annotation not available (383 aa)
 
 
  0.712
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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