Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_4512 | HasF | DR97_4512 | DR97_4518 | annotation not available | Alkaline protease secretion protein AprF; type_I_sec_TolC: type I secretion outer membrane , TolC family protein | 0.513 |
DR97_4512 | hasA | DR97_4512 | DR97_4514 | annotation not available | annotation not available | 0.456 |
DR97_4512 | hasE | DR97_4512 | DR97_4516 | annotation not available | type_I_hlyD: type I secretion membrane fusion , HlyD family protein | 0.464 |
DR97_4512 | hasR | DR97_4512 | DR97_4513 | annotation not available | annotation not available | 0.801 |
DR97_4512 | pigA | DR97_4512 | DR97_1447 | annotation not available | Heme oxygenase (biliverdin-ix-beta and delta-forming); Involved in heme degradation. Catalyzes the degradation of heme to biliverdin, with the release of iron. Forms biliverdin delta (70%) and beta (30%) | 0.525 |
DR97_4512 | pvdS | DR97_4512 | DR97_6007 | annotation not available | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.873 |
FecA | hasR | DR97_4663 | DR97_4513 | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.744 |
FecA | pigA | DR97_4663 | DR97_1447 | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | Heme oxygenase (biliverdin-ix-beta and delta-forming); Involved in heme degradation. Catalyzes the degradation of heme to biliverdin, with the release of iron. Forms biliverdin delta (70%) and beta (30%) | 0.530 |
FecA | pvdS | DR97_4663 | DR97_6007 | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.692 |
HasF | DR97_4512 | DR97_4518 | DR97_4512 | Alkaline protease secretion protein AprF; type_I_sec_TolC: type I secretion outer membrane , TolC family protein | annotation not available | 0.513 |
HasF | PhuW | DR97_4518 | DR97_2047 | Alkaline protease secretion protein AprF; type_I_sec_TolC: type I secretion outer membrane , TolC family protein | Hypothetical protein; Uncharacterized protein | 0.497 |
HasF | hasA | DR97_4518 | DR97_4514 | Alkaline protease secretion protein AprF; type_I_sec_TolC: type I secretion outer membrane , TolC family protein | annotation not available | 0.892 |
HasF | hasD | DR97_4518 | DR97_4515 | Alkaline protease secretion protein AprF; type_I_sec_TolC: type I secretion outer membrane , TolC family protein | Atp-binding cassette, subfamily c, bacterial exporter for protease/lipase; Alkaline protease secretion ATP-binding protein AprD; type_I_sec_PrtD: type I secretion system ATPase family protein | 0.995 |
HasF | hasE | DR97_4518 | DR97_4516 | Alkaline protease secretion protein AprF; type_I_sec_TolC: type I secretion outer membrane , TolC family protein | type_I_hlyD: type I secretion membrane fusion , HlyD family protein | 0.998 |
HasF | hasR | DR97_4518 | DR97_4513 | Alkaline protease secretion protein AprF; type_I_sec_TolC: type I secretion outer membrane , TolC family protein | annotation not available | 0.898 |
PhuS | PhuW | DR97_2051 | DR97_2047 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.774 |
PhuS | hasA | DR97_2051 | DR97_4514 | annotation not available | annotation not available | 0.854 |
PhuS | hasD | DR97_2051 | DR97_4515 | annotation not available | Atp-binding cassette, subfamily c, bacterial exporter for protease/lipase; Alkaline protease secretion ATP-binding protein AprD; type_I_sec_PrtD: type I secretion system ATPase family protein | 0.500 |
PhuS | hasE | DR97_2051 | DR97_4516 | annotation not available | type_I_hlyD: type I secretion membrane fusion , HlyD family protein | 0.520 |
PhuS | hasR | DR97_2051 | DR97_4513 | annotation not available | annotation not available | 0.889 |
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