Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1640 | DR97_4521 | DR97_1640 | DR97_4521 | annotation not available | annotation not available | 0.593 |
DR97_1640 | DR97_4522 | DR97_1640 | DR97_4522 | annotation not available | annotation not available | 0.603 |
DR97_1640 | potA1 | DR97_1640 | DR97_3163 | annotation not available | Polyamine abc transporter, atp-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system | 0.792 |
DR97_4519 | DR97_4520 | DR97_4519 | DR97_4520 | Phosphate-starvation-inducible e family protein; Belongs to the PsiE family | Multidrug resistance protein MdtN; RND_mfp: efflux transporter, RND family, MFP subunit | 0.607 |
DR97_4519 | DR97_4521 | DR97_4519 | DR97_4521 | Phosphate-starvation-inducible e family protein; Belongs to the PsiE family | annotation not available | 0.582 |
DR97_4519 | DR97_4522 | DR97_4519 | DR97_4522 | Phosphate-starvation-inducible e family protein; Belongs to the PsiE family | annotation not available | 0.582 |
DR97_4519 | DR97_4523 | DR97_4519 | DR97_4523 | Phosphate-starvation-inducible e family protein; Belongs to the PsiE family | Hypothetical protein; Putative periplasmic lipoprotein | 0.449 |
DR97_4520 | DR97_4519 | DR97_4520 | DR97_4519 | Multidrug resistance protein MdtN; RND_mfp: efflux transporter, RND family, MFP subunit | Phosphate-starvation-inducible e family protein; Belongs to the PsiE family | 0.607 |
DR97_4520 | DR97_4521 | DR97_4520 | DR97_4521 | Multidrug resistance protein MdtN; RND_mfp: efflux transporter, RND family, MFP subunit | annotation not available | 0.985 |
DR97_4520 | DR97_4522 | DR97_4520 | DR97_4522 | Multidrug resistance protein MdtN; RND_mfp: efflux transporter, RND family, MFP subunit | annotation not available | 0.986 |
DR97_4520 | DR97_4523 | DR97_4520 | DR97_4523 | Multidrug resistance protein MdtN; RND_mfp: efflux transporter, RND family, MFP subunit | Hypothetical protein; Putative periplasmic lipoprotein | 0.668 |
DR97_4521 | DR97_1640 | DR97_4521 | DR97_1640 | annotation not available | annotation not available | 0.593 |
DR97_4521 | DR97_4519 | DR97_4521 | DR97_4519 | annotation not available | Phosphate-starvation-inducible e family protein; Belongs to the PsiE family | 0.582 |
DR97_4521 | DR97_4520 | DR97_4521 | DR97_4520 | annotation not available | Multidrug resistance protein MdtN; RND_mfp: efflux transporter, RND family, MFP subunit | 0.985 |
DR97_4521 | DR97_4522 | DR97_4521 | DR97_4522 | annotation not available | annotation not available | 0.963 |
DR97_4521 | DR97_4523 | DR97_4521 | DR97_4523 | annotation not available | Hypothetical protein; Putative periplasmic lipoprotein | 0.668 |
DR97_4521 | ccmB | DR97_4521 | DR97_547 | annotation not available | Heme exporter protein ccmb; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes | 0.538 |
DR97_4521 | potA1 | DR97_4521 | DR97_3163 | annotation not available | Polyamine abc transporter, atp-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system | 0.529 |
DR97_4521 | rpsL | DR97_4521 | DR97_3643 | annotation not available | Small subunit ribosomal protein s12; With S4 and S5 plays an important role in translational accuracy | 0.542 |
DR97_4521 | rpsN | DR97_4521 | DR97_3661 | annotation not available | Small subunit ribosomal protein s14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site | 0.543 |
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