STRINGSTRING
DR97_4523 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_4523" - Putative periplasmic lipoprotein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_4523Putative periplasmic lipoprotein (113 aa)    
Predicted Functional Partners:
DR97_5998
Uncharacterized protein (181 aa)
   
        0.700
DR97_4522
annotation not available (377 aa)
              0.668
yhhJ_2
annotation not available (390 aa)
              0.668
mdtN_3
Multidrug resistance protein MdtN; RND_mfp- efflux transporter, RND family, MFP subunit (323 aa)
              0.668
DR97_6051
DUF1654 domain-containing protein (80 aa)
   
          0.590
DR97_5610
DUF4946 domain-containing protein (180 aa)
   
          0.568
DR97_4517
Uncharacterized protein (95 aa)
 
          0.554
DR97_5993
annotation not available (666 aa)
   
          0.521
DR97_5208
Uncharacterized protein (76 aa)
   
          0.490
psiE
annotation not available (161 aa)
              0.449
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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