Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PhnD | PhnI | DR97_4539 | DR97_4544 | phnD: phosphonate ABC transporter, periplasmic phosphonate binding protein | annotation not available | 0.971 |
PhnD | phnF | DR97_4539 | DR97_4541 | phnD: phosphonate ABC transporter, periplasmic phosphonate binding protein | Gntr family transcriptional regulator, phosphonate transport system regulatory protein; Transcriptional regulator; C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF | 0.990 |
PhnD | phnG | DR97_4539 | DR97_4542 | phnD: phosphonate ABC transporter, periplasmic phosphonate binding protein | Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG; phnG_redo: phosphonate C-P lyase system protein PhnG | 0.967 |
PhnD | phnH | DR97_4539 | DR97_4543 | phnD: phosphonate ABC transporter, periplasmic phosphonate binding protein | Alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phnh; Carbon-phosphorus lyase complex subunit; phnH_redo: phosphonate C-P lyase system protein PhnH | 0.971 |
PhnD | phnJ | DR97_4539 | DR97_4545 | phnD: phosphonate ABC transporter, periplasmic phosphonate binding protein | Alpha-d-ribose 1-methylphosphonate 5-phosphate c-p lyase; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose | 0.990 |
PhnD | phnK | DR97_4539 | DR97_4546 | phnD: phosphonate ABC transporter, periplasmic phosphonate binding protein | Putative phosphonates utilization ATP-binding protein PhnK; CP_lyasePhnK: phosphonate C-P lyase system protein PhnK | 0.975 |
PhnD | phnL | DR97_4539 | DR97_4547 | phnD: phosphonate ABC transporter, periplasmic phosphonate binding protein | Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL; CP_lyasePhnL: phosphonate C-P lyase system protein PhnL | 0.960 |
PhnD | phnM | DR97_4539 | DR97_4548 | phnD: phosphonate ABC transporter, periplasmic phosphonate binding protein | Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase; phosphono_phnM: phosphonate metabolism protein PhnM | 0.962 |
PhnD | phnN | DR97_4539 | DR97_4549 | phnD: phosphonate ABC transporter, periplasmic phosphonate binding protein | Phosphonate metabolism protein/1,5-bisphosphokinase (prpp-forming) phnn; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP) | 0.949 |
PhnD | phnP | DR97_4539 | DR97_4550 | phnD: phosphonate ABC transporter, periplasmic phosphonate binding protein | Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase; phnP: phosphonate metabolism protein PhnP | 0.961 |
PhnI | PhnD | DR97_4544 | DR97_4539 | annotation not available | phnD: phosphonate ABC transporter, periplasmic phosphonate binding protein | 0.971 |
PhnI | phnF | DR97_4544 | DR97_4541 | annotation not available | Gntr family transcriptional regulator, phosphonate transport system regulatory protein; Transcriptional regulator; C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF | 0.998 |
PhnI | phnG | DR97_4544 | DR97_4542 | annotation not available | Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG; phnG_redo: phosphonate C-P lyase system protein PhnG | 0.999 |
PhnI | phnH | DR97_4544 | DR97_4543 | annotation not available | Alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phnh; Carbon-phosphorus lyase complex subunit; phnH_redo: phosphonate C-P lyase system protein PhnH | 0.999 |
PhnI | phnJ | DR97_4544 | DR97_4545 | annotation not available | Alpha-d-ribose 1-methylphosphonate 5-phosphate c-p lyase; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose | 0.999 |
PhnI | phnK | DR97_4544 | DR97_4546 | annotation not available | Putative phosphonates utilization ATP-binding protein PhnK; CP_lyasePhnK: phosphonate C-P lyase system protein PhnK | 0.999 |
PhnI | phnL | DR97_4544 | DR97_4547 | annotation not available | Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL; CP_lyasePhnL: phosphonate C-P lyase system protein PhnL | 0.999 |
PhnI | phnM | DR97_4544 | DR97_4548 | annotation not available | Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase; phosphono_phnM: phosphonate metabolism protein PhnM | 0.999 |
PhnI | phnN | DR97_4544 | DR97_4549 | annotation not available | Phosphonate metabolism protein/1,5-bisphosphokinase (prpp-forming) phnn; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP) | 0.998 |
PhnI | phnP | DR97_4544 | DR97_4550 | annotation not available | Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase; phnP: phosphonate metabolism protein PhnP | 0.978 |
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