STRINGSTRING
lecB protein (Pseudomonas aeruginosa) - STRING interaction network
"lecB" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lecBannotation not available (115 aa)    
Predicted Functional Partners:
lecA
annotation not available (122 aa)
     
   
  0.933
rpoS
rpoS_proteo- RNA polymerase sigma factor RpoS (334 aa)
     
   
  0.707
lasB
annotation not available (498 aa)
     
   
  0.596
DR97_102
annotation not available (231 aa)
     
   
  0.591
DR97_5001
annotation not available (536 aa)
     
        0.584
DR97_5915
annotation not available (431 aa)
     
        0.572
phzH
Potential phenazine-modifying enzyme; asn_synth_AEB- asparagine synthase (610 aa)
     
   
  0.553
DR97_4499
DUF1302 domain-containing protein (585 aa)
           
  0.550
phaA
PHA_synth_II- poly(R)-hydroxyalkanoic acid synthase, class II family protein (559 aa)
     
        0.545
DR97_3942
annotation not available (560 aa)
     
   
  0.543
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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