STRINGSTRING
slyA protein (Pseudomonas aeruginosa) - STRING interaction network
"slyA" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slyAannotation not available (144 aa)    
Predicted Functional Partners:
marR
annotation not available (156 aa)
   
     
  0.897
mexR
annotation not available (147 aa)
           
  0.786
recQ
recQ- ATP-dependent DNA helicase RecQ (712 aa)
 
     
  0.675
DR97_4585
Uncharacterized protein (338 aa)
         
  0.656
mliC
annotation not available (127 aa)
           
  0.629
DR97_2358
annotation not available (298 aa)
     
   
  0.470
DR97_3211
UbiD-like decarboxylase; Catalyzes the reversible decarboxylation of aromatic carboxylic acids (496 aa)
           
  0.463
DR97_2607
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis; Belongs to the UbiD family (488 aa)
           
  0.463
DR97_4587
Putative Tfp pilus assembly protein; fimV_core- FimV N-terminal domain (683 aa)
   
        0.441
DR97_999
Transcriptional antiterminator; Modulator of Rho-dependent transcription termination family protein (108 aa)
           
  0.439
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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