Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cyp23 | DR97_4198 | DR97_4596 | DR97_4198 | Belongs to the cytochrome P450 family | Cytochrome p450 family protein; Belongs to the cytochrome P450 family | 0.679 |
Cyp23 | DR97_4592 | DR97_4596 | DR97_4592 | Belongs to the cytochrome P450 family | annotation not available | 0.667 |
Cyp23 | DR97_4593 | DR97_4596 | DR97_4593 | Belongs to the cytochrome P450 family | annotation not available | 0.851 |
Cyp23 | DR97_4595 | DR97_4596 | DR97_4595 | Belongs to the cytochrome P450 family | Uncharacterized protein; Belongs to the PhzA/PhzB family | 0.959 |
Cyp23 | DR97_4597 | DR97_4596 | DR97_4597 | Belongs to the cytochrome P450 family | annotation not available | 0.936 |
Cyp23 | DR97_4598 | DR97_4596 | DR97_4598 | Belongs to the cytochrome P450 family | annotation not available | 0.961 |
Cyp23 | DR97_4599 | DR97_4596 | DR97_4599 | Belongs to the cytochrome P450 family | annotation not available | 0.957 |
Cyp23 | DR97_4600 | DR97_4596 | DR97_4600 | Belongs to the cytochrome P450 family | Putative non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein | 0.956 |
Cyp23 | fabH | DR97_4596 | DR97_4594 | Belongs to the cytochrome P450 family | 3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids | 0.939 |
Cyp23 | vanB | DR97_4596 | DR97_2257 | Belongs to the cytochrome P450 family | annotation not available | 0.886 |
DR97_4198 | Cyp23 | DR97_4198 | DR97_4596 | Cytochrome p450 family protein; Belongs to the cytochrome P450 family | Belongs to the cytochrome P450 family | 0.679 |
DR97_4198 | DR97_4597 | DR97_4198 | DR97_4597 | Cytochrome p450 family protein; Belongs to the cytochrome P450 family | annotation not available | 0.554 |
DR97_4198 | DR97_4599 | DR97_4198 | DR97_4599 | Cytochrome p450 family protein; Belongs to the cytochrome P450 family | annotation not available | 0.432 |
DR97_4198 | DR97_4600 | DR97_4198 | DR97_4600 | Cytochrome p450 family protein; Belongs to the cytochrome P450 family | Putative non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein | 0.442 |
DR97_4592 | Cyp23 | DR97_4592 | DR97_4596 | annotation not available | Belongs to the cytochrome P450 family | 0.667 |
DR97_4592 | DR97_4593 | DR97_4592 | DR97_4593 | annotation not available | annotation not available | 0.695 |
DR97_4592 | DR97_4595 | DR97_4592 | DR97_4595 | annotation not available | Uncharacterized protein; Belongs to the PhzA/PhzB family | 0.599 |
DR97_4592 | DR97_4597 | DR97_4592 | DR97_4597 | annotation not available | annotation not available | 0.657 |
DR97_4592 | DR97_4598 | DR97_4592 | DR97_4598 | annotation not available | annotation not available | 0.583 |
DR97_4592 | DR97_4599 | DR97_4592 | DR97_4599 | annotation not available | annotation not available | 0.677 |
page 1 of 5