Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_4672 | DR97_4674 | DR97_4672 | DR97_4674 | annotation not available | annotation not available | 0.643 |
DR97_4672 | DR97_4675 | DR97_4672 | DR97_4675 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.593 |
DR97_4672 | DR97_4676 | DR97_4672 | DR97_4676 | annotation not available | annotation not available | 0.593 |
DR97_4672 | DR97_4719 | DR97_4672 | DR97_4719 | annotation not available | Conserved hypothetical protein | 0.406 |
DR97_4672 | DR97_816 | DR97_4672 | DR97_816 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.482 |
DR97_4672 | fimX | DR97_4672 | DR97_2312 | annotation not available | GGDEF: diguanylate cyclase domain protein | 0.448 |
DR97_4672 | lapD | DR97_4672 | DR97_590 | annotation not available | annotation not available | 0.421 |
DR97_4672 | mexR | DR97_4672 | DR97_3392 | annotation not available | Marr family transcriptional regulator, repressor of the mexab-oprm multidrug resistance operon; Repressor of the mexAB-oprM multidrug resistance operon. Also represses its own expression. Many variants lead to increased expression of the mexAB-oprM operon | 0.412 |
DR97_4674 | DR97_4672 | DR97_4674 | DR97_4672 | annotation not available | annotation not available | 0.643 |
DR97_4674 | DR97_4675 | DR97_4674 | DR97_4675 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.965 |
DR97_4674 | DR97_4676 | DR97_4674 | DR97_4676 | annotation not available | annotation not available | 0.893 |
DR97_4675 | DR97_4672 | DR97_4675 | DR97_4672 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.593 |
DR97_4675 | DR97_4674 | DR97_4675 | DR97_4674 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.965 |
DR97_4675 | DR97_4676 | DR97_4675 | DR97_4676 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.906 |
DR97_4676 | DR97_4672 | DR97_4676 | DR97_4672 | annotation not available | annotation not available | 0.593 |
DR97_4676 | DR97_4674 | DR97_4676 | DR97_4674 | annotation not available | annotation not available | 0.893 |
DR97_4676 | DR97_4675 | DR97_4676 | DR97_4675 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.906 |
DR97_4719 | DR97_4672 | DR97_4719 | DR97_4672 | Conserved hypothetical protein | annotation not available | 0.406 |
DR97_816 | DR97_4672 | DR97_816 | DR97_4672 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.482 |
fimX | DR97_4672 | DR97_2312 | DR97_4672 | GGDEF: diguanylate cyclase domain protein | annotation not available | 0.448 |
page 1 of 2