Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_4709 | DR97_4710 | DR97_4709 | DR97_4710 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.900 |
DR97_4709 | DR97_5670 | DR97_4709 | DR97_5670 | annotation not available | annotation not available | 0.468 |
DR97_4709 | ppiA | DR97_4709 | DR97_4708 | annotation not available | Peptidyl-prolyl cis-trans isomerase a (cyclophilin a); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. This protein is not essential for growth. Presumably plays a role in signal transduction | 0.904 |
DR97_4710 | DR97_4709 | DR97_4710 | DR97_4709 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | annotation not available | 0.900 |
DR97_4710 | ppiA | DR97_4710 | DR97_4708 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | Peptidyl-prolyl cis-trans isomerase a (cyclophilin a); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. This protein is not essential for growth. Presumably plays a role in signal transduction | 0.907 |
DR97_5670 | DR97_4709 | DR97_5670 | DR97_4709 | annotation not available | annotation not available | 0.468 |
DR97_5670 | FkbP-1 | DR97_5670 | DR97_4160 | annotation not available | annotation not available | 0.436 |
DR97_5670 | dnaK | DR97_5670 | DR97_2105 | annotation not available | Molecular chaperone dnak; Acts as a chaperone | 0.825 |
DR97_5670 | fusA | DR97_5670 | DR97_3645 | annotation not available | Translation elongation factor g; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome | 0.888 |
DR97_5670 | fusB | DR97_5670 | DR97_5775 | annotation not available | Translation elongation factor g; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome | 0.888 |
DR97_5670 | hrpA | DR97_5670 | DR97_4633 | annotation not available | Putative atp-dependent helicase; DEAH_box_HrpA: ATP-dependent helicase HrpA | 0.917 |
DR97_5670 | hrpB | DR97_5670 | DR97_3905 | annotation not available | DEAH_box_HrpB: ATP-dependent helicase HrpB | 0.917 |
DR97_5670 | hscA | DR97_5670 | DR97_4059 | annotation not available | Fe-s protein assembly chaperone hsca; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB (By similarity) | 0.834 |
DR97_5670 | ppiA | DR97_5670 | DR97_4708 | annotation not available | Peptidyl-prolyl cis-trans isomerase a (cyclophilin a); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. This protein is not essential for growth. Presumably plays a role in signal transduction | 0.840 |
FkbP-1 | DR97_5670 | DR97_4160 | DR97_5670 | annotation not available | annotation not available | 0.436 |
FkbP-1 | dnaK | DR97_4160 | DR97_2105 | annotation not available | Molecular chaperone dnak; Acts as a chaperone | 0.689 |
FkbP-1 | hrpA | DR97_4160 | DR97_4633 | annotation not available | Putative atp-dependent helicase; DEAH_box_HrpA: ATP-dependent helicase HrpA | 0.447 |
FkbP-1 | hrpB | DR97_4160 | DR97_3905 | annotation not available | DEAH_box_HrpB: ATP-dependent helicase HrpB | 0.420 |
FkbP-1 | hscA | DR97_4160 | DR97_4059 | annotation not available | Fe-s protein assembly chaperone hsca; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB (By similarity) | 0.694 |
FkbP-1 | ppiA | DR97_4160 | DR97_4708 | annotation not available | Peptidyl-prolyl cis-trans isomerase a (cyclophilin a); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. This protein is not essential for growth. Presumably plays a role in signal transduction | 0.811 |
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