STRINGSTRING
kdgR_4 protein (Pseudomonas aeruginosa) - STRING interaction network
"kdgR_4" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdgR_4annotation not available (242 aa)    
Predicted Functional Partners:
hutG1
Formimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide; Belongs to the arginase family (311 aa)
 
        0.904
gltS
Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate (404 aa)
 
          0.755
iclR
annotation not available (259 aa)
   
          0.716
pcaR
Pca regulon regulatory protein; pcaR_pcaU- beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family protein (279 aa)
   
          0.597
yciK
annotation not available (246 aa)
   
   
  0.562
DR97_259
annotation not available (288 aa)
   
          0.495
gph2
PGP_bact- phosphoglycolate phosphatase, bacterial (223 aa)
   
        0.429
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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