Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1718 | DR97_4776 | DR97_1718 | DR97_4776 | Hypothetical protein; DUF3094 domain-containing protein | annotation not available | 0.542 |
DR97_4776 | DR97_1718 | DR97_4776 | DR97_1718 | annotation not available | Hypothetical protein; DUF3094 domain-containing protein | 0.542 |
DR97_4776 | DR97_4777 | DR97_4776 | DR97_4777 | annotation not available | UDP-glucose/GDP-mannose dehydrogenase-like protein; NDP-sugDHase: nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family | 0.611 |
DR97_4776 | DR97_4785 | DR97_4776 | DR97_4785 | annotation not available | annotation not available | 0.565 |
DR97_4776 | WaaL | DR97_4776 | DR97_2354 | annotation not available | O-antigen ligase family protein; Potential O-antigen polymerase, which may be involved in the synthesis of LPS | 0.865 |
DR97_4776 | Wzm | DR97_4776 | DR97_5282 | annotation not available | annotation not available | 0.678 |
DR97_4776 | pslD | DR97_4776 | DR97_6317 | annotation not available | annotation not available | 0.564 |
DR97_4776 | pslE | DR97_4776 | DR97_6316 | annotation not available | annotation not available | 0.540 |
DR97_4776 | wbpM | DR97_4776 | DR97_4787 | annotation not available | annotation not available | 0.875 |
DR97_4776 | wzm | DR97_4776 | DR97_2830 | annotation not available | annotation not available | 0.678 |
DR97_4776 | wzt | DR97_4776 | DR97_2829 | annotation not available | annotation not available | 0.630 |
DR97_4777 | DR97_4776 | DR97_4777 | DR97_4776 | UDP-glucose/GDP-mannose dehydrogenase-like protein; NDP-sugDHase: nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family | annotation not available | 0.611 |
DR97_4777 | DR97_4785 | DR97_4777 | DR97_4785 | UDP-glucose/GDP-mannose dehydrogenase-like protein; NDP-sugDHase: nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family | annotation not available | 0.633 |
DR97_4777 | pslD | DR97_4777 | DR97_6317 | UDP-glucose/GDP-mannose dehydrogenase-like protein; NDP-sugDHase: nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family | annotation not available | 0.449 |
DR97_4777 | pslE | DR97_4777 | DR97_6316 | UDP-glucose/GDP-mannose dehydrogenase-like protein; NDP-sugDHase: nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family | annotation not available | 0.733 |
DR97_4777 | wbpM | DR97_4777 | DR97_4787 | UDP-glucose/GDP-mannose dehydrogenase-like protein; NDP-sugDHase: nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family | annotation not available | 0.736 |
DR97_4785 | DR97_4776 | DR97_4785 | DR97_4776 | annotation not available | annotation not available | 0.565 |
DR97_4785 | DR97_4777 | DR97_4785 | DR97_4777 | annotation not available | UDP-glucose/GDP-mannose dehydrogenase-like protein; NDP-sugDHase: nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family | 0.633 |
DR97_4785 | wbpM | DR97_4785 | DR97_4787 | annotation not available | annotation not available | 0.981 |
WaaL | DR97_4776 | DR97_2354 | DR97_4776 | O-antigen ligase family protein; Potential O-antigen polymerase, which may be involved in the synthesis of LPS | annotation not available | 0.865 |
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