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vipA protein (Pseudomonas aeruginosa) - STRING interaction network
"vipA" - UDP-glucose/GDP-mannose dehydrogenase-like protein in Pseudomonas aeruginosa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vipAUDP-glucose/GDP-mannose dehydrogenase-like protein; NDP-sugDHase- nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (422 aa)    
Predicted Functional Partners:
wbgU
annotation not available (340 aa)
 
  0.997
vgrG1
VgrG1; vgr_GE- Rhs element Vgr family protein (646 aa)
      
   
  0.857
hcpA1
annotation not available (172 aa)
      
   
  0.857
pppA
annotation not available (242 aa)
      
   
  0.856
hcp1
annotation not available (162 aa)
      
   
  0.856
clpV1-3
VI_ClpV1- type VI secretion ATPase, ClpV1 family (849 aa)
            
  0.854
clpV1-1
VI_ClpV1- type VI secretion ATPase, ClpV1 family (902 aa)
            
  0.854
clpV1-2
VI_ClpV1- type VI secretion ATPase, ClpV1 family; Belongs to the ClpA/ClpB family (875 aa)
            
  0.854
DR97_4784
annotation not available (372 aa)
 
   
  0.851
DR97_638
annotation not available (374 aa)
 
   
  0.847
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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