STRINGSTRING
mdr protein (Pseudomonas aeruginosa) - STRING interaction network
"mdr" - Uncharacterized protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
mdrUncharacterized protein; RND_mfp- efflux transporter, RND family, MFP subunit (344 aa)    
Predicted Functional Partners:
DR97_4792
Uncharacterized protein; efflux_EmrB- drug resistance MFS transporter, drug-H+ antiporter-2 family protein; Belongs to the major facilitator superfamily (519 aa)
 
 
  0.981
drrA
annotation not available (310 aa)
         
  0.863
ywnB
annotation not available (213 aa)
           
  0.854
DR97_698
Major facilitator superfamily (MFS) transporter; efflux_EmrB- drug resistance MFS transporter, drug-H+ antiporter-2 family protein; Belongs to the major facilitator superfamily (503 aa)
 
 
  0.836
emrB
efflux_EmrB- drug resistance MFS transporter, drug-H+ antiporter-2 family protein; Belongs to the major facilitator superfamily (509 aa)
 
 
  0.738
dmlR_25
annotation not available (306 aa)
              0.610
emrB_4
annotation not available (530 aa)
   
  0.598
opmE
outer_NodT- efflux transporter, outer membrane factor (OMF) lipo, NodT family protein (491 aa)
 
 
  0.569
pltN
outer_NodT- efflux transporter, outer membrane factor (OMF) lipo, NodT family protein (502 aa)
 
 
  0.564
oprN
outer_NodT- efflux transporter, outer membrane factor (OMF) lipo, NodT family protein (472 aa)
 
 
  0.561
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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