Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR97_4803 | KdgA | DR97_4803 | DR97_4802 | annotation not available | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein; eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein | 0.872 |
| DR97_4803 | dusC | DR97_4803 | DR97_4804 | annotation not available | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs | 0.757 |
| KdgA | DR97_4803 | DR97_4802 | DR97_4803 | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein; eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein | annotation not available | 0.872 |
| KdgA | dusC | DR97_4802 | DR97_4804 | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein; eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs | 0.625 |
| dusC | DR97_4803 | DR97_4804 | DR97_4803 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs | annotation not available | 0.757 |
| dusC | KdgA | DR97_4804 | DR97_4802 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein; eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein | 0.625 |
| dusC | rimO | DR97_4804 | DR97_1024 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs | Ribosomal protein s12 methylthiotransferase rimo; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 | 0.711 |
| dusC | rluA | DR97_4804 | DR97_4689 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs | annotation not available | 0.924 |
| dusC | rsuA | DR97_4804 | DR97_1253 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs | Pseudouridine synthase family protein; Responsible for synthesis of pseudouridine from uracil-516 in 16S ribosomal RNA | 0.854 |
| dusC | trmA | DR97_4804 | DR97_2062 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs | Trna (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA) | 0.844 |
| dusC | trmB | DR97_4804 | DR97_3349 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs | Trna (guanine-n(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA | 0.660 |
| dusC | trmD | DR97_4804 | DR97_4133 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs | Trna (guanine(37)-n(1))-methyltransferase; Specifically methylates guanosine-37 in various tRNAs | 0.881 |
| dusC | truB | DR97_4804 | DR97_2085 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs | Trna pseudouridine(55) synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs (By similarity). Osmoprotectant regulator of PLC | 0.933 |
| dusC | truD | DR97_4804 | DR97_4313 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs | Trna pseudouridine synthase, trud family protein; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs | 0.890 |
| rimO | dusC | DR97_1024 | DR97_4804 | Ribosomal protein s12 methylthiotransferase rimo; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs | 0.711 |
| rimO | rluA | DR97_1024 | DR97_4689 | Ribosomal protein s12 methylthiotransferase rimo; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 | annotation not available | 0.923 |
| rimO | truB | DR97_1024 | DR97_2085 | Ribosomal protein s12 methylthiotransferase rimo; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 | Trna pseudouridine(55) synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs (By similarity). Osmoprotectant regulator of PLC | 0.841 |
| rluA | dusC | DR97_4689 | DR97_4804 | annotation not available | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs | 0.924 |
| rluA | rimO | DR97_4689 | DR97_1024 | annotation not available | Ribosomal protein s12 methylthiotransferase rimo; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 | 0.923 |
| rluA | rsuA | DR97_4689 | DR97_1253 | annotation not available | Pseudouridine synthase family protein; Responsible for synthesis of pseudouridine from uracil-516 in 16S ribosomal RNA | 0.957 |
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