Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3180 | asd | DR97_3180 | DR97_4816 | Dihydrodipicolinate synthetase family protein; Belongs to the DapA family | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | 0.928 |
DR97_3180 | dapA | DR97_3180 | DR97_937 | Dihydrodipicolinate synthetase family protein; Belongs to the DapA family | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA) | 0.838 |
DR97_3180 | hom | DR97_3180 | DR97_4141 | Dihydrodipicolinate synthetase family protein; Belongs to the DapA family | annotation not available | 0.933 |
DR97_3180 | usg | DR97_3180 | DR97_4817 | Dihydrodipicolinate synthetase family protein; Belongs to the DapA family | Belongs to the aspartate-semialdehyde dehydrogenase family | 0.925 |
DR97_5960 | asd | DR97_5960 | DR97_4816 | annotation not available | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | 0.988 |
DR97_5960 | hom | DR97_5960 | DR97_4141 | annotation not available | annotation not available | 0.482 |
DR97_5960 | lysC | DR97_5960 | DR97_1039 | annotation not available | Aspartate kinase, monofunctional class; Belongs to the aspartokinase family | 0.783 |
DR97_5960 | usg | DR97_5960 | DR97_4817 | annotation not available | Belongs to the aspartate-semialdehyde dehydrogenase family | 0.979 |
DR97_683 | asd | DR97_683 | DR97_4816 | 1-pyrroline-4-hydroxy-2-carboxylate deaminase; Belongs to the DapA family | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | 0.928 |
DR97_683 | usg | DR97_683 | DR97_4817 | 1-pyrroline-4-hydroxy-2-carboxylate deaminase; Belongs to the DapA family | Belongs to the aspartate-semialdehyde dehydrogenase family | 0.925 |
asd | DR97_3180 | DR97_4816 | DR97_3180 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | Dihydrodipicolinate synthetase family protein; Belongs to the DapA family | 0.928 |
asd | DR97_5960 | DR97_4816 | DR97_5960 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | annotation not available | 0.988 |
asd | DR97_683 | DR97_4816 | DR97_683 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | 1-pyrroline-4-hydroxy-2-carboxylate deaminase; Belongs to the DapA family | 0.928 |
asd | dapA | DR97_4816 | DR97_937 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA) | 0.993 |
asd | hom | DR97_4816 | DR97_4141 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | annotation not available | 0.977 |
asd | lysC | DR97_4816 | DR97_1039 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | Aspartate kinase, monofunctional class; Belongs to the aspartokinase family | 0.997 |
asd | pvdH | DR97_4816 | DR97_6020 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | 2,4-diaminobutyrate 4-transaminase family protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family | 0.935 |
asd | thrC | DR97_4816 | DR97_4142 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine | 0.879 |
asd | truA | DR97_4816 | DR97_4819 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | Trna pseudouridine(38-40) synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs | 0.600 |
asd | usg | DR97_4816 | DR97_4817 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate | Belongs to the aspartate-semialdehyde dehydrogenase family | 0.942 |
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