Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2973 | chpA | DR97_2973 | DR97_3381 | annotation not available | annotation not available | 0.514 |
DR97_2973 | fimL | DR97_2973 | DR97_57 | annotation not available | annotation not available | 0.758 |
DR97_2973 | fimV | DR97_2973 | DR97_4818 | annotation not available | Motility protein FimV; fimV_core: FimV N-terminal domain | 0.927 |
DR97_2973 | pilF | DR97_2973 | DR97_4064 | annotation not available | Uncharacterized protein; type_IV_pilW: type IV pilus biogenesis/stability protein PilW | 0.728 |
DR97_2973 | pilG | DR97_2973 | DR97_3376 | annotation not available | Twitching motility two-component system response regulator pilg; Is involved in pilus biosynthesis and twitching motility. May act as a single-domain response regulator whose function may be to receive a certain environmental signal(s) and then transduce that signal to the pilus assembly machinery via specific protein-protein interactions | 0.553 |
DR97_2973 | pilN | DR97_2973 | DR97_2398 | annotation not available | annotation not available | 0.892 |
chpA | DR97_2973 | DR97_3381 | DR97_2973 | annotation not available | annotation not available | 0.514 |
chpA | cyaB | DR97_3381 | DR97_4717 | annotation not available | annotation not available | 0.956 |
chpA | fimL | DR97_3381 | DR97_57 | annotation not available | annotation not available | 0.576 |
chpA | fimV | DR97_3381 | DR97_4818 | annotation not available | Motility protein FimV; fimV_core: FimV N-terminal domain | 0.803 |
chpA | pilG | DR97_3381 | DR97_3376 | annotation not available | Twitching motility two-component system response regulator pilg; Is involved in pilus biosynthesis and twitching motility. May act as a single-domain response regulator whose function may be to receive a certain environmental signal(s) and then transduce that signal to the pilus assembly machinery via specific protein-protein interactions | 0.981 |
chpA | pilJ | DR97_3381 | DR97_3379 | annotation not available | Methyl-accepting chemotaxis (mcp) signaling domain protein; May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) | 0.999 |
chpA | pilN | DR97_3381 | DR97_2398 | annotation not available | annotation not available | 0.649 |
chpA | tonB3 | DR97_3381 | DR97_3374 | annotation not available | Tonb domain-containing protein; tonB_Cterm: TonB family C-terminal domain protein | 0.660 |
cyaB | chpA | DR97_4717 | DR97_3381 | annotation not available | annotation not available | 0.956 |
cyaB | fimL | DR97_4717 | DR97_57 | annotation not available | annotation not available | 0.950 |
cyaB | fimV | DR97_4717 | DR97_4818 | annotation not available | Motility protein FimV; fimV_core: FimV N-terminal domain | 0.877 |
cyaB | pilG | DR97_4717 | DR97_3376 | annotation not available | Twitching motility two-component system response regulator pilg; Is involved in pilus biosynthesis and twitching motility. May act as a single-domain response regulator whose function may be to receive a certain environmental signal(s) and then transduce that signal to the pilus assembly machinery via specific protein-protein interactions | 0.977 |
cyaB | pilJ | DR97_4717 | DR97_3379 | annotation not available | Methyl-accepting chemotaxis (mcp) signaling domain protein; May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) | 0.911 |
fimL | DR97_2973 | DR97_57 | DR97_2973 | annotation not available | annotation not available | 0.758 |
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