STRINGSTRING
pelB protein (Pseudomonas aeruginosa) - STRING interaction network
"pelB" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pelBannotation not available (1193 aa)    
Predicted Functional Partners:
pelC
annotation not available (172 aa)
 
   
  0.994
pelA
Uncharacterized protein (948 aa)
 
   
  0.993
pelD
annotation not available (455 aa)
 
 
  0.991
pelF
annotation not available (507 aa)
 
 
  0.991
pelE
Uncharacterized protein (329 aa)
 
 
  0.988
pelG
annotation not available (456 aa)
 
   
  0.983
DR97_3832
annotation not available (333 aa)
 
     
  0.653
DR97_2046
annotation not available (265 aa)
   
 
  0.618
DR97_5232
annotation not available (2098 aa)
 
 
  0.573
DR97_875
annotation not available (613 aa)
   
 
  0.562
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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