Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_4849 | dnaK | DR97_4849 | DR97_2105 | annotation not available | Molecular chaperone dnak; Acts as a chaperone | 0.661 |
DR97_4849 | pelB | DR97_4849 | DR97_4873 | annotation not available | annotation not available | 0.716 |
alaS | dnaK | DR97_1040 | DR97_2105 | Alanyl-trna synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain | Molecular chaperone dnak; Acts as a chaperone | 0.623 |
alaS | pelB | DR97_1040 | DR97_4873 | Alanyl-trna synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain | annotation not available | 0.792 |
apaH | dnaK | DR97_3559 | DR97_2105 | Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP | Molecular chaperone dnak; Acts as a chaperone | 0.726 |
apaH | pelB | DR97_3559 | DR97_4873 | Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP | annotation not available | 0.716 |
dnaK | DR97_4849 | DR97_2105 | DR97_4849 | Molecular chaperone dnak; Acts as a chaperone | annotation not available | 0.661 |
dnaK | alaS | DR97_2105 | DR97_1040 | Molecular chaperone dnak; Acts as a chaperone | Alanyl-trna synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain | 0.623 |
dnaK | apaH | DR97_2105 | DR97_3559 | Molecular chaperone dnak; Acts as a chaperone | Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP | 0.726 |
dnaK | pelB | DR97_2105 | DR97_4873 | Molecular chaperone dnak; Acts as a chaperone | annotation not available | 0.701 |
pelA | pelB | DR97_4872 | DR97_4873 | Polysaccharide biosynthesis protein pela; Uncharacterized protein | annotation not available | 0.998 |
pelA | pelC | DR97_4872 | DR97_4874 | Polysaccharide biosynthesis protein pela; Uncharacterized protein | annotation not available | 0.992 |
pelA | pelD | DR97_4872 | DR97_4875 | Polysaccharide biosynthesis protein pela; Uncharacterized protein | annotation not available | 0.993 |
pelA | pelE | DR97_4872 | DR97_4876 | Polysaccharide biosynthesis protein pela; Uncharacterized protein | Polysaccharide biosynthesis protein pele; Uncharacterized protein | 0.993 |
pelA | pelF | DR97_4872 | DR97_4877 | Polysaccharide biosynthesis protein pela; Uncharacterized protein | annotation not available | 0.993 |
pelA | pelG | DR97_4872 | DR97_4878 | Polysaccharide biosynthesis protein pela; Uncharacterized protein | annotation not available | 0.993 |
pelB | DR97_4849 | DR97_4873 | DR97_4849 | annotation not available | annotation not available | 0.716 |
pelB | alaS | DR97_4873 | DR97_1040 | annotation not available | Alanyl-trna synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain | 0.792 |
pelB | apaH | DR97_4873 | DR97_3559 | annotation not available | Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP | 0.716 |
pelB | dnaK | DR97_4873 | DR97_2105 | annotation not available | Molecular chaperone dnak; Acts as a chaperone | 0.701 |
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