STRINGSTRING
yqjE protein (Pseudomonas aeruginosa) - STRING interaction network
"yqjE" - Uncharacterized protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yqjEUncharacterized protein (126 aa)    
Predicted Functional Partners:
DR97_4896
DUF883 domain-containing protein (109 aa)
 
   
  0.965
DR97_4894
Putative membrane protein (107 aa)
 
          0.858
DR97_471
DUF883 domain-containing protein (110 aa)
 
   
  0.792
DR97_5201
DUF883 domain-containing protein (109 aa)
 
   
  0.755
DR97_5086
Uncharacterized protein (92 aa)
   
          0.626
DR97_2015
Uncharacterized protein (265 aa)
   
          0.624
DR97_5138
Chromosome partitioning protein ParA (87 aa)
   
          0.602
DR97_4675
Uncharacterized protein (119 aa)
   
          0.595
crfX
annotation not available (82 aa)
   
          0.592
DR97_3806
Uncharacterized protein (118 aa)
   
          0.591
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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