Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2771 | DR97_4900 | DR97_2771 | DR97_4900 | Uncharacterized protein | annotation not available | 0.605 |
DR97_4899 | DR97_4900 | DR97_4899 | DR97_4900 | annotation not available | annotation not available | 0.853 |
DR97_4899 | DR97_4901 | DR97_4899 | DR97_4901 | annotation not available | Putative glutathione s-transferase; Belongs to the GST superfamily | 0.832 |
DR97_4899 | DR97_4902 | DR97_4899 | DR97_4902 | annotation not available | annotation not available | 0.675 |
DR97_4899 | OpdQ | DR97_4899 | DR97_4898 | annotation not available | annotation not available | 0.560 |
DR97_4900 | DR97_2771 | DR97_4900 | DR97_2771 | annotation not available | Uncharacterized protein | 0.605 |
DR97_4900 | DR97_4899 | DR97_4900 | DR97_4899 | annotation not available | annotation not available | 0.853 |
DR97_4900 | DR97_4901 | DR97_4900 | DR97_4901 | annotation not available | Putative glutathione s-transferase; Belongs to the GST superfamily | 0.931 |
DR97_4900 | DR97_4902 | DR97_4900 | DR97_4902 | annotation not available | annotation not available | 0.637 |
DR97_4900 | DR97_5184 | DR97_4900 | DR97_5184 | annotation not available | annotation not available | 0.518 |
DR97_4900 | OpdQ | DR97_4900 | DR97_4898 | annotation not available | annotation not available | 0.494 |
DR97_4900 | gbcB | DR97_4900 | DR97_2789 | annotation not available | annotation not available | 0.807 |
DR97_4900 | hmp | DR97_4900 | DR97_5296 | annotation not available | Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress | 0.890 |
DR97_4900 | metH | DR97_4900 | DR97_34 | annotation not available | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate (By similarity) | 0.545 |
DR97_4900 | pheT | DR97_4900 | DR97_5223 | annotation not available | Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily | 0.474 |
DR97_4901 | DR97_4899 | DR97_4901 | DR97_4899 | Putative glutathione s-transferase; Belongs to the GST superfamily | annotation not available | 0.832 |
DR97_4901 | DR97_4900 | DR97_4901 | DR97_4900 | Putative glutathione s-transferase; Belongs to the GST superfamily | annotation not available | 0.931 |
DR97_4901 | DR97_4902 | DR97_4901 | DR97_4902 | Putative glutathione s-transferase; Belongs to the GST superfamily | annotation not available | 0.561 |
DR97_4901 | OpdQ | DR97_4901 | DR97_4898 | Putative glutathione s-transferase; Belongs to the GST superfamily | annotation not available | 0.476 |
DR97_4902 | DR97_4899 | DR97_4902 | DR97_4899 | annotation not available | annotation not available | 0.675 |
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