STRINGSTRING
lsrK protein (Pseudomonas aeruginosa) - STRING interaction network
"lsrK" - Autoinducer 2 kinase LsrK in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lsrKAutoinducer 2 kinase LsrK; FGGY family of carbohydrate kinase, N-terminal domain protein (519 aa)    
Predicted Functional Partners:
glpD_2
annotation not available (526 aa)
   
  0.982
DR97_4911
annotation not available (531 aa)
 
   
  0.978
rbsB
annotation not available (319 aa)
   
   
  0.881
yegS
lip_kinase_YegS- lipid kinase YegS (302 aa)
            0.875
DR97_4910
annotation not available (343 aa)
 
          0.715
nagF
PTS_I_fam- phosphoenolpyruvate-protein phosphotransferase (842 aa)
     
 
  0.687
cheV
annotation not available (310 aa)
            0.660
fruI
Phosphotransferase system transporter enzyme I, FruI; PTS_I_fam- phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family (956 aa)
       
 
  0.653
perM
Transport of quorum-sensing signal protein (357 aa)
         
  0.586
DR97_4585
Uncharacterized protein (338 aa)
 
   
  0.470
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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