STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_4913Putative carbohydrate kinase; Autoinducer 2 kinase LsrK; FGGY family of carbohydrate kinase, N-terminal domain protein (519 aa)    
Predicted Functional Partners:
GlpD2
annotation not available
  
 0.982
DR97_4911
annotation not available
 
  
 0.979
rpe
Belongs to the ribulose-phosphate 3-epimerase family
 
 0.948
yegS
Lipid kinase yegs; Probably phosphorylates lipids; the in vivo substrate is unknown
      0.875
xylB
Xylulose kinase; xylB: xylulokinase
  
  
 
0.820
rbsB
annotation not available
  
  
 0.748
DR97_4910
annotation not available
 
   
 0.722
DR97_4578
annotation not available
      0.661
NagF
Putative phosphoenolpyruvate-protein phosphotransferase; PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase
   
 
 0.624
tal
Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
  
 
 0.580
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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