STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rcnRannotation not available (91 aa)    
Predicted Functional Partners:
DR97_497
Uncharacterized protein; CDF: cation diffusion facilitator transporter family protein
 
  
 0.960
arsR
annotation not available
     
 0.867
DR97_1801
annotation not available
      
 0.856
DR97_5509
annotation not available
      
 0.856
adhC
S-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily
  
  
 0.816
CzcD
Cobalt-zinc-cadmium resistance protein CzcD; CDF: cation diffusion facilitator transporter family protein
     
 0.733
cueR
Merr family transcriptional regulator, copper efflux regulator; Putative HTH-type transcriptional regulator PA4778; cueR: Cu(I)-responsive transcriptional regulator
      
 0.714
fghA
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde
  
  
 0.691
czcA
Rnd divalent metal cation efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
  
  
 0.690
YcgN
Putative zinc-/iron-chelating domain protein; Belongs to the UPF0260 family
  
    0.637
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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