STRINGSTRING
rcnR protein (Pseudomonas aeruginosa) - STRING interaction network
"rcnR" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rcnRannotation not available (91 aa)    
Predicted Functional Partners:
DR97_497
Uncharacterized protein; CDF- cation diffusion facilitator transporter family protein (318 aa)
 
   
  0.888
arsR
annotation not available (116 aa)
         
  0.788
frmA
adh_III_F_hyde- S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily (370 aa)
   
   
  0.786
ycgN
annotation not available (149 aa)
   
        0.637
czcA
annotation not available (1051 aa)
   
   
  0.595
fghA
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde (283 aa)
   
   
  0.580
feoB
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system (766 aa)
   
   
  0.578
czcD
Cobalt-zinc-cadmium resistance protein CzcD; CDF- cation diffusion facilitator transporter family protein (299 aa)
         
  0.558
czcB
annotation not available (484 aa)
         
  0.554
yejF1
Putative ABC transporter ATP-binding protein YejF; nickel_nikE- nickel import ATP-binding protein NikE; Belongs to the ABC transporter superfamily (536 aa)
            
  0.553
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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