STRINGSTRING
gph_1 protein (Pseudomonas aeruginosa) - STRING interaction network
"gph_1" - Phosphoglycolate phosphatase in Pseudomonas aeruginosa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
gph_1Phosphoglycolate phosphatase; HAD-SF-IA-v1- HAD hydrolase, IA, variant 1 family protein (230 aa)    
Predicted Functional Partners:
rluC
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (318 aa)
   
        0.955
sppA
sppA_dom- signal peptide peptidase SppA, 36K type (326 aa)
   
        0.912
DR97_3970
annotation not available (325 aa)
   
 
    0.902
hprA
annotation not available (323 aa)
   
 
    0.902
glcD
Putative FAD-linked oxidoreductase; glcD- glycolate oxidase, subunit GlcD (499 aa)
       
  0.902
glcE
annotation not available (359 aa)
       
  0.902
glcF
annotation not available (408 aa)
       
    0.901
gph1
PGP_bact- phosphoglycolate phosphatase, bacterial (272 aa)
   
   
0.855
dehII
HAD_type_II- haloacid dehalogenase, type II (233 aa)
         
  0.740
DR97_4492
annotation not available (298 aa)
           
  0.714
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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