Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3609 | YcfH | DR97_3609 | DR97_4980 | annotation not available | annotation not available | 0.581 |
DR97_3609 | holB | DR97_3609 | DR97_4978 | annotation not available | Dna polymerase iii, delta' subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity (By similarity) | 0.534 |
DR97_3609 | tmk | DR97_3609 | DR97_4977 | annotation not available | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis | 0.465 |
YcfH | DR97_3609 | DR97_4980 | DR97_3609 | annotation not available | annotation not available | 0.581 |
YcfH | acpP1 | DR97_4980 | DR97_4973 | annotation not available | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis | 0.604 |
YcfH | fabF1 | DR97_4980 | DR97_4974 | annotation not available | Beta-ketoacyl-acyl-carrier-protein synthase ii; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP | 0.668 |
YcfH | holB | DR97_4980 | DR97_4978 | annotation not available | Dna polymerase iii, delta' subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity (By similarity) | 0.939 |
YcfH | mltG | DR97_4980 | DR97_4976 | annotation not available | Yceg-like family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation | 0.791 |
YcfH | pabC | DR97_4980 | DR97_4975 | annotation not available | 4-amino-4-deoxychorismate lyase; pabC_Proteo: aminodeoxychorismate lyase | 0.818 |
YcfH | pilZ | DR97_4980 | DR97_4979 | annotation not available | annotation not available | 0.867 |
YcfH | plsX | DR97_4980 | DR97_4970 | annotation not available | Fatty acid/phospholipid synthesis protein plsx; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA | 0.547 |
YcfH | polA | DR97_4980 | DR97_2871 | annotation not available | In addition to polymerase activity, this DNA polymerase exhibits 3'-5' and 5'-3' exonuclease activity | 0.555 |
YcfH | tmk | DR97_4980 | DR97_4977 | annotation not available | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis | 0.864 |
acpP1 | YcfH | DR97_4973 | DR97_4980 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis | annotation not available | 0.604 |
acpP1 | fabF1 | DR97_4973 | DR97_4974 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis | Beta-ketoacyl-acyl-carrier-protein synthase ii; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP | 0.989 |
acpP1 | holB | DR97_4973 | DR97_4978 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis | Dna polymerase iii, delta' subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity (By similarity) | 0.683 |
acpP1 | mltG | DR97_4973 | DR97_4976 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis | Yceg-like family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation | 0.680 |
acpP1 | pabC | DR97_4973 | DR97_4975 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis | 4-amino-4-deoxychorismate lyase; pabC_Proteo: aminodeoxychorismate lyase | 0.746 |
acpP1 | pilZ | DR97_4973 | DR97_4979 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis | annotation not available | 0.614 |
acpP1 | plsX | DR97_4973 | DR97_4970 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis | Fatty acid/phospholipid synthesis protein plsx; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA | 0.891 |
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