STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
hisQHistidine transport system permease protein HisQ; HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein (229 aa)    
Predicted Functional Partners:
hisM
annotation not available
 
0.995
hisP
Histidine transport system atp-binding protein; Part of the histidine permease ABC transporter. Responsible for energy coupling to the transport system (By similarity)
 0.994
hisJ
annotation not available
 0.990
DR97_2520
Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family
 
 0.898
DR97_4001
Arginine/ornithine transport system substrate-binding protein; 3A0103s03R: lysine-arginine-ornithine-binding periplasmic family protein
 
 0.894
aotJ
Arginine/ornithine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family
 
 0.877
aotP
Arginine/ornithine transport system atp-binding protein; Part of the arginine-inducible binding-protein-dependent transport system for arginine and ornithine. Probably responsible for energy coupling to the transport system
 
 0.863
DR97_2519
annotation not available
 
 0.859
aotM
Octopine transport system permease protein OccM; HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein
 
0.824
FliY
Bacterial extracellular solute-binding s, 3 family protein; Belongs to the bacterial solute-binding protein 3 family
 
 0.810
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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