Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2519 | DR97_2520 | DR97_2519 | DR97_2520 | annotation not available | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | 0.991 |
DR97_2519 | DR97_4001 | DR97_2519 | DR97_4001 | annotation not available | Arginine/ornithine transport system substrate-binding protein; 3A0103s03R: lysine-arginine-ornithine-binding periplasmic family protein | 0.796 |
DR97_2519 | FliY | DR97_2519 | DR97_3278 | annotation not available | Bacterial extracellular solute-binding s, 3 family protein; Belongs to the bacterial solute-binding protein 3 family | 0.665 |
DR97_2519 | aotJ | DR97_2519 | DR97_1055 | annotation not available | Arginine/ornithine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | 0.769 |
DR97_2519 | aotM | DR97_2519 | DR97_1053 | annotation not available | Octopine transport system permease protein OccM; HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.843 |
DR97_2519 | hisJ | DR97_2519 | DR97_5018 | annotation not available | annotation not available | 0.787 |
DR97_2519 | hisM | DR97_2519 | DR97_5016 | annotation not available | annotation not available | 0.834 |
DR97_2519 | hisQ | DR97_2519 | DR97_5017 | annotation not available | Histidine transport system permease protein HisQ; HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.859 |
DR97_2520 | DR97_2519 | DR97_2520 | DR97_2519 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | annotation not available | 0.991 |
DR97_2520 | aotM | DR97_2520 | DR97_1053 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | Octopine transport system permease protein OccM; HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.905 |
DR97_2520 | aotP | DR97_2520 | DR97_1051 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | Arginine/ornithine transport system atp-binding protein; Part of the arginine-inducible binding-protein-dependent transport system for arginine and ornithine. Probably responsible for energy coupling to the transport system | 0.781 |
DR97_2520 | hisM | DR97_2520 | DR97_5016 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | annotation not available | 0.849 |
DR97_2520 | hisP | DR97_2520 | DR97_5015 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | Histidine transport system atp-binding protein; Part of the histidine permease ABC transporter. Responsible for energy coupling to the transport system (By similarity) | 0.925 |
DR97_2520 | hisQ | DR97_2520 | DR97_5017 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | Histidine transport system permease protein HisQ; HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.898 |
DR97_4001 | DR97_2519 | DR97_4001 | DR97_2519 | Arginine/ornithine transport system substrate-binding protein; 3A0103s03R: lysine-arginine-ornithine-binding periplasmic family protein | annotation not available | 0.796 |
DR97_4001 | aotJ | DR97_4001 | DR97_1055 | Arginine/ornithine transport system substrate-binding protein; 3A0103s03R: lysine-arginine-ornithine-binding periplasmic family protein | Arginine/ornithine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | 0.808 |
DR97_4001 | aotM | DR97_4001 | DR97_1053 | Arginine/ornithine transport system substrate-binding protein; 3A0103s03R: lysine-arginine-ornithine-binding periplasmic family protein | Octopine transport system permease protein OccM; HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.975 |
DR97_4001 | aotP | DR97_4001 | DR97_1051 | Arginine/ornithine transport system substrate-binding protein; 3A0103s03R: lysine-arginine-ornithine-binding periplasmic family protein | Arginine/ornithine transport system atp-binding protein; Part of the arginine-inducible binding-protein-dependent transport system for arginine and ornithine. Probably responsible for energy coupling to the transport system | 0.959 |
DR97_4001 | hisM | DR97_4001 | DR97_5016 | Arginine/ornithine transport system substrate-binding protein; 3A0103s03R: lysine-arginine-ornithine-binding periplasmic family protein | annotation not available | 0.846 |
DR97_4001 | hisP | DR97_4001 | DR97_5015 | Arginine/ornithine transport system substrate-binding protein; 3A0103s03R: lysine-arginine-ornithine-binding periplasmic family protein | Histidine transport system atp-binding protein; Part of the histidine permease ABC transporter. Responsible for energy coupling to the transport system (By similarity) | 0.802 |
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