Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1520 | DR97_5019 | DR97_1520 | DR97_5019 | Amidohydrolases: amidohydrolase family protein | Amidohydrolases: amidohydrolase family protein | 0.816 |
DR97_1520 | metH | DR97_1520 | DR97_34 | Amidohydrolases: amidohydrolase family protein | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate (By similarity) | 0.431 |
DR97_5019 | DR97_1520 | DR97_5019 | DR97_1520 | Amidohydrolases: amidohydrolase family protein | Amidohydrolases: amidohydrolase family protein | 0.816 |
DR97_5019 | DR97_5020 | DR97_5019 | DR97_5020 | Amidohydrolases: amidohydrolase family protein | Lysr family transcriptional regulator, regulator of abg operon; Belongs to the LysR transcriptional regulatory family | 0.666 |
DR97_5019 | DR97_5021 | DR97_5019 | DR97_5021 | Amidohydrolases: amidohydrolase family protein | annotation not available | 0.423 |
DR97_5019 | hisJ | DR97_5019 | DR97_5018 | Amidohydrolases: amidohydrolase family protein | annotation not available | 0.692 |
DR97_5019 | hisM | DR97_5019 | DR97_5016 | Amidohydrolases: amidohydrolase family protein | annotation not available | 0.541 |
DR97_5019 | hisP | DR97_5019 | DR97_5015 | Amidohydrolases: amidohydrolase family protein | Histidine transport system atp-binding protein; Part of the histidine permease ABC transporter. Responsible for energy coupling to the transport system (By similarity) | 0.526 |
DR97_5019 | hisQ | DR97_5019 | DR97_5017 | Amidohydrolases: amidohydrolase family protein | Histidine transport system permease protein HisQ; HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.551 |
DR97_5019 | metH | DR97_5019 | DR97_34 | Amidohydrolases: amidohydrolase family protein | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate (By similarity) | 0.431 |
DR97_5020 | DR97_5019 | DR97_5020 | DR97_5019 | Lysr family transcriptional regulator, regulator of abg operon; Belongs to the LysR transcriptional regulatory family | Amidohydrolases: amidohydrolase family protein | 0.666 |
DR97_5020 | DR97_5021 | DR97_5020 | DR97_5021 | Lysr family transcriptional regulator, regulator of abg operon; Belongs to the LysR transcriptional regulatory family | annotation not available | 0.598 |
DR97_5020 | hisJ | DR97_5020 | DR97_5018 | Lysr family transcriptional regulator, regulator of abg operon; Belongs to the LysR transcriptional regulatory family | annotation not available | 0.524 |
DR97_5020 | hisM | DR97_5020 | DR97_5016 | Lysr family transcriptional regulator, regulator of abg operon; Belongs to the LysR transcriptional regulatory family | annotation not available | 0.450 |
DR97_5021 | DR97_5019 | DR97_5021 | DR97_5019 | annotation not available | Amidohydrolases: amidohydrolase family protein | 0.423 |
DR97_5021 | DR97_5020 | DR97_5021 | DR97_5020 | annotation not available | Lysr family transcriptional regulator, regulator of abg operon; Belongs to the LysR transcriptional regulatory family | 0.598 |
hisJ | DR97_5019 | DR97_5018 | DR97_5019 | annotation not available | Amidohydrolases: amidohydrolase family protein | 0.692 |
hisJ | DR97_5020 | DR97_5018 | DR97_5020 | annotation not available | Lysr family transcriptional regulator, regulator of abg operon; Belongs to the LysR transcriptional regulatory family | 0.524 |
hisJ | hisM | DR97_5018 | DR97_5016 | annotation not available | annotation not available | 0.988 |
hisJ | hisP | DR97_5018 | DR97_5015 | annotation not available | Histidine transport system atp-binding protein; Part of the histidine permease ABC transporter. Responsible for energy coupling to the transport system (By similarity) | 0.997 |
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