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DR97_5045 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_5045" - sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein in Pseudomonas aeruginosa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_5045sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (211 aa)    
Predicted Functional Partners:
DR97_5046
Uncharacterized protein (254 aa)
 
        0.942
mucA
Sigma factor AlgU negative regulatory protein; Anti sigma-E RseA, N-terminal domain protein (194 aa)
   
 
  0.601
flgJ
Peptidoglycan hydrolase flgJ; flagell_FlgJ- flagellar rod assembly protein/muramidase FlgJ (400 aa)
       
      0.559
mucB
annotation not available (316 aa)
   
 
  0.540
DR97_4645
annotation not available (79 aa)
 
          0.462
yjiR_2
annotation not available (479 aa)
   
        0.451
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1399 aa)
   
 
  0.434
DR97_1815
annotation not available (226 aa)
     
 
  0.432
DR97_1712
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (69 aa)
   
          0.425
DR97_5047
Uncharacterized protein (140 aa)
              0.400
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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