STRINGSTRING
DR97_5046 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_5046" - Uncharacterized protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_5046Uncharacterized protein (254 aa)    
Predicted Functional Partners:
DR97_5045
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (211 aa)
 
        0.942
DR97_1712
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (69 aa)
   
          0.774
DR97_5208
Uncharacterized protein (76 aa)
   
          0.771
DR97_3027
annotation not available (304 aa)
   
          0.740
DR97_3028
annotation not available (570 aa)
   
          0.726
DR97_6159
annotation not available (125 aa)
   
          0.724
DR97_1417
annotation not available (328 aa)
   
          0.717
DR97_4645
annotation not available (79 aa)
   
          0.712
DR97_1946
Putative membrane protein (92 aa)
   
          0.686
DR97_3029
annotation not available (399 aa)
   
          0.677
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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