hsdl2 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

hsdl2

annotation not available (274 aa)

Predicted Functional Partners:

DR97_5048

0.973

atuB

0.958

MCCC1

0.814

acdh-6

0.755

atuE

0.722

mccB

0.589

atuA

0.544

fabF1

0.477

fabF3

0.471

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_5048	MCCC1	DR97_5048	DR97_5050	annotation not available	annotation not available	0.470
DR97_5048	acdh-6	DR97_5048	DR97_5052	annotation not available	acyl-CoA dehydrogenase, N-terminal domain protein	0.952
DR97_5048	atuA	DR97_5048	DR97_5055	annotation not available	Uncharacterized protein	0.551
DR97_5048	atuB	DR97_5048	DR97_5054	annotation not available	annotation not available	0.957
DR97_5048	atuE	DR97_5048	DR97_5051	annotation not available	annotation not available	0.558
DR97_5048	hsdl2	DR97_5048	DR97_5049	annotation not available	annotation not available	0.973
DR97_5048	mccB	DR97_5048	DR97_5053	annotation not available	annotation not available	0.406
MCCC1	DR97_5048	DR97_5050	DR97_5048	annotation not available	annotation not available	0.470
MCCC1	acdh-6	DR97_5050	DR97_5052	annotation not available	acyl-CoA dehydrogenase, N-terminal domain protein	0.978
MCCC1	atuA	DR97_5050	DR97_5055	annotation not available	Uncharacterized protein	0.634
MCCC1	atuB	DR97_5050	DR97_5054	annotation not available	annotation not available	0.631
MCCC1	atuE	DR97_5050	DR97_5051	annotation not available	annotation not available	0.981
MCCC1	fabF1	DR97_5050	DR97_4974	annotation not available	3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP	0.418
MCCC1	fabF3	DR97_5050	DR97_425	annotation not available	3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP	0.422
MCCC1	hsdl2	DR97_5050	DR97_5049	annotation not available	annotation not available	0.814
MCCC1	mccB	DR97_5050	DR97_5053	annotation not available	annotation not available	0.976
acdh-6	DR97_5048	DR97_5052	DR97_5048	acyl-CoA dehydrogenase, N-terminal domain protein	annotation not available	0.952
acdh-6	MCCC1	DR97_5052	DR97_5050	acyl-CoA dehydrogenase, N-terminal domain protein	annotation not available	0.978
acdh-6	atuA	DR97_5052	DR97_5055	acyl-CoA dehydrogenase, N-terminal domain protein	Uncharacterized protein	0.842
acdh-6	atuB	DR97_5052	DR97_5054	acyl-CoA dehydrogenase, N-terminal domain protein	annotation not available	0.920

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