Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AmaB | DR97_505 | DR97_3411 | DR97_505 | Beta-ureidopropionase / n-carbamoyl-l-amino-acid hydrolase; Allantoate amidohydrolase; Hydantase: amidase, hydantoinase/carbamoylase family protein | Hypothetical protein; Uncharacterized protein | 0.475 |
AmaB | alc | DR97_3411 | DR97_507 | Beta-ureidopropionase / n-carbamoyl-l-amino-acid hydrolase; Allantoate amidohydrolase; Hydantase: amidase, hydantoinase/carbamoylase family protein | Belongs to the allantoicase family | 0.869 |
AmaB | uraD | DR97_3411 | DR97_506 | Beta-ureidopropionase / n-carbamoyl-l-amino-acid hydrolase; Allantoate amidohydrolase; Hydantase: amidase, hydantoinase/carbamoylase family protein | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; UHCUDC: OHCU decarboxylase | 0.884 |
AmaB | uraH | DR97_3411 | DR97_504 | Beta-ureidopropionase / n-carbamoyl-l-amino-acid hydrolase; Allantoate amidohydrolase; Hydantase: amidase, hydantoinase/carbamoylase family protein | Putative transthyretin family protein; Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo- 4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) | 0.417 |
DR97_505 | AmaB | DR97_505 | DR97_3411 | Hypothetical protein; Uncharacterized protein | Beta-ureidopropionase / n-carbamoyl-l-amino-acid hydrolase; Allantoate amidohydrolase; Hydantase: amidase, hydantoinase/carbamoylase family protein | 0.475 |
DR97_505 | DR97_509 | DR97_505 | DR97_509 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.899 |
DR97_505 | Gda1 | DR97_505 | DR97_415 | Hypothetical protein; Uncharacterized protein | Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia | 0.782 |
DR97_505 | GuaD | DR97_505 | DR97_3091 | Hypothetical protein; Uncharacterized protein | Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia | 0.780 |
DR97_505 | alc | DR97_505 | DR97_507 | Hypothetical protein; Uncharacterized protein | Belongs to the allantoicase family | 0.934 |
DR97_505 | allA | DR97_505 | DR97_508 | Hypothetical protein; Uncharacterized protein | Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source | 0.861 |
DR97_505 | uraD | DR97_505 | DR97_506 | Hypothetical protein; Uncharacterized protein | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; UHCUDC: OHCU decarboxylase | 0.996 |
DR97_505 | uraH | DR97_505 | DR97_504 | Hypothetical protein; Uncharacterized protein | Putative transthyretin family protein; Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo- 4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) | 0.847 |
DR97_505 | xdhB | DR97_505 | DR97_413 | Hypothetical protein; Uncharacterized protein | xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit | 0.741 |
DR97_509 | DR97_505 | DR97_509 | DR97_505 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.899 |
DR97_509 | Gda1 | DR97_509 | DR97_415 | annotation not available | Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia | 0.734 |
DR97_509 | GuaD | DR97_509 | DR97_3091 | annotation not available | Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia | 0.727 |
DR97_509 | alc | DR97_509 | DR97_507 | annotation not available | Belongs to the allantoicase family | 0.793 |
DR97_509 | allA | DR97_509 | DR97_508 | annotation not available | Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source | 0.938 |
DR97_509 | uraD | DR97_509 | DR97_506 | annotation not available | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; UHCUDC: OHCU decarboxylase | 0.915 |
DR97_509 | uraH | DR97_509 | DR97_504 | annotation not available | Putative transthyretin family protein; Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo- 4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) | 0.830 |
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