Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1214 | DR97_5067 | DR97_1214 | DR97_5067 | Hypothetical protein; DUF4845 domain-containing protein | Hypothetical protein; Uncharacterized protein | 0.654 |
DR97_1214 | pilM | DR97_1214 | DR97_2399 | Hypothetical protein; DUF4845 domain-containing protein | pilM: type IV pilus assembly PilM family protein | 0.444 |
DR97_1214 | pilN | DR97_1214 | DR97_2398 | Hypothetical protein; DUF4845 domain-containing protein | annotation not available | 0.491 |
DR97_1214 | pilP | DR97_1214 | DR97_2396 | Hypothetical protein; DUF4845 domain-containing protein | annotation not available | 0.498 |
DR97_1214 | pilZ | DR97_1214 | DR97_4979 | Hypothetical protein; DUF4845 domain-containing protein | annotation not available | 0.461 |
DR97_1214 | tgpA | DR97_1214 | DR97_5068 | Hypothetical protein; DUF4845 domain-containing protein | Transglutaminase-like domain-containing protein; Displays transglutaminase activity (TGase) in vitro. Plays a critical role in the viability of P.aeruginosa. Might contribute to an essential function linked to the cell wall | 0.657 |
DR97_2973 | DR97_5067 | DR97_2973 | DR97_5067 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.660 |
DR97_2973 | pilM | DR97_2973 | DR97_2399 | annotation not available | pilM: type IV pilus assembly PilM family protein | 0.850 |
DR97_2973 | pilN | DR97_2973 | DR97_2398 | annotation not available | annotation not available | 0.892 |
DR97_2973 | pilP | DR97_2973 | DR97_2396 | annotation not available | annotation not available | 0.856 |
DR97_2973 | pilZ | DR97_2973 | DR97_4979 | annotation not available | annotation not available | 0.776 |
DR97_2973 | tgpA | DR97_2973 | DR97_5068 | annotation not available | Transglutaminase-like domain-containing protein; Displays transglutaminase activity (TGase) in vitro. Plays a critical role in the viability of P.aeruginosa. Might contribute to an essential function linked to the cell wall | 0.610 |
DR97_5066 | DR97_5067 | DR97_5066 | DR97_5067 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.964 |
DR97_5066 | DR97_5069 | DR97_5066 | DR97_5069 | annotation not available | annotation not available | 0.845 |
DR97_5066 | DR97_5070 | DR97_5066 | DR97_5070 | annotation not available | annotation not available | 0.606 |
DR97_5066 | tgpA | DR97_5066 | DR97_5068 | annotation not available | Transglutaminase-like domain-containing protein; Displays transglutaminase activity (TGase) in vitro. Plays a critical role in the viability of P.aeruginosa. Might contribute to an essential function linked to the cell wall | 0.962 |
DR97_5067 | DR97_1214 | DR97_5067 | DR97_1214 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; DUF4845 domain-containing protein | 0.654 |
DR97_5067 | DR97_2973 | DR97_5067 | DR97_2973 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.660 |
DR97_5067 | DR97_5066 | DR97_5067 | DR97_5066 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.964 |
DR97_5067 | DR97_5069 | DR97_5067 | DR97_5069 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.845 |
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