Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2588 | DR97_3789 | DR97_2588 | DR97_3789 | annotation not available | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | 0.548 |
DR97_2588 | DR97_4642 | DR97_2588 | DR97_4642 | annotation not available | annotation not available | 0.522 |
DR97_2588 | DR97_5072 | DR97_2588 | DR97_5072 | annotation not available | annotation not available | 0.412 |
DR97_2588 | DR97_5073 | DR97_2588 | DR97_5073 | annotation not available | Hypothetical protein; Terminase | 0.493 |
DR97_2588 | ahpF | DR97_2588 | DR97_3097 | annotation not available | Alkyl hydroperoxide reductase subunit f; Serves to protect the cell against DNA damage by alkyl hydroperoxides. It can use either NADH or NADPH as electron donor for direct reduction of redox dyes or of alkyl hydroperoxides when combined with the AhpC protein (By similarity) | 0.440 |
DR97_3789 | DR97_2588 | DR97_3789 | DR97_2588 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | annotation not available | 0.548 |
DR97_3789 | DR97_4642 | DR97_3789 | DR97_4642 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | annotation not available | 0.412 |
DR97_3789 | DR97_5072 | DR97_3789 | DR97_5072 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | annotation not available | 0.410 |
DR97_3789 | DR97_5073 | DR97_3789 | DR97_5073 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | Hypothetical protein; Terminase | 0.483 |
DR97_3789 | ahpF | DR97_3789 | DR97_3097 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | Alkyl hydroperoxide reductase subunit f; Serves to protect the cell against DNA damage by alkyl hydroperoxides. It can use either NADH or NADPH as electron donor for direct reduction of redox dyes or of alkyl hydroperoxides when combined with the AhpC protein (By similarity) | 0.420 |
DR97_4642 | DR97_2588 | DR97_4642 | DR97_2588 | annotation not available | annotation not available | 0.522 |
DR97_4642 | DR97_3789 | DR97_4642 | DR97_3789 | annotation not available | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | 0.412 |
DR97_4642 | DR97_5072 | DR97_4642 | DR97_5072 | annotation not available | annotation not available | 0.429 |
DR97_4642 | DR97_5073 | DR97_4642 | DR97_5073 | annotation not available | Hypothetical protein; Terminase | 0.514 |
DR97_4642 | ahpF | DR97_4642 | DR97_3097 | annotation not available | Alkyl hydroperoxide reductase subunit f; Serves to protect the cell against DNA damage by alkyl hydroperoxides. It can use either NADH or NADPH as electron donor for direct reduction of redox dyes or of alkyl hydroperoxides when combined with the AhpC protein (By similarity) | 0.616 |
DR97_5071 | DR97_5072 | DR97_5071 | DR97_5072 | GGDEF: diguanylate cyclase domain protein | annotation not available | 0.863 |
DR97_5071 | DR97_5073 | DR97_5071 | DR97_5073 | GGDEF: diguanylate cyclase domain protein | Hypothetical protein; Terminase | 0.632 |
DR97_5071 | gacS | DR97_5071 | DR97_1011 | GGDEF: diguanylate cyclase domain protein | annotation not available | 0.719 |
DR97_5072 | DR97_2588 | DR97_5072 | DR97_2588 | annotation not available | annotation not available | 0.412 |
DR97_5072 | DR97_3789 | DR97_5072 | DR97_3789 | annotation not available | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | 0.410 |
page 1 of 2