Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_223 | DR97_226 | DR97_223 | DR97_226 | annotation not available | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | 0.967 |
DR97_223 | DR97_230 | DR97_223 | DR97_230 | annotation not available | Type vi secretion system protein impc; Type VI secretion protein, EvpB/ family | 0.863 |
DR97_223 | DR97_231 | DR97_223 | DR97_231 | annotation not available | Type vi secretion system protein impb; Uncharacterized protein | 0.890 |
DR97_223 | DR97_4777 | DR97_223 | DR97_4777 | annotation not available | UDP-glucose/GDP-mannose dehydrogenase-like protein; NDP-sugDHase: nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family | 0.485 |
DR97_223 | DR97_510 | DR97_223 | DR97_510 | annotation not available | annotation not available | 0.923 |
DR97_223 | DR97_6061 | DR97_223 | DR97_6061 | annotation not available | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | 0.636 |
DR97_223 | vgrG1a | DR97_223 | DR97_3048 | annotation not available | Rhs element vgr family protein; Part of the H1 type VI secretion system (H1-T6SS) specialized secretion system, which delivers several virulence factors in both prokaryotic and eukaryotic cells during infection Forms the spike at the tip of the elongating tube formed by haemolysin co-regulated protein 1/Hcp1 . Allows the delivery of the Tse6 toxin to target cells where it exerts its toxicity | 0.401 |
DR97_223 | vgrG2a | DR97_223 | DR97_511 | annotation not available | Part of the H2 type VI secretion system (H2-T6SS) specialized secretion system, which delivers several virulence factors in both prokaryotic and eukaryotic cells during infection . May form the spike at the tip of the elongating tube formed by haemolysin co-regulated protein 2a/Hcp2a. In turn, may allow the delivery of the Tle4 antibacterial toxin to target cells where it exerts its toxicity (Probable). Promotes also the release of VgrG2b toxin to the host cell | 0.648 |
DR97_223 | wbgU | DR97_223 | DR97_4778 | annotation not available | annotation not available | 0.488 |
DR97_226 | DR97_223 | DR97_226 | DR97_223 | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | annotation not available | 0.967 |
DR97_226 | DR97_230 | DR97_226 | DR97_230 | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | Type vi secretion system protein impc; Type VI secretion protein, EvpB/ family | 0.830 |
DR97_226 | DR97_231 | DR97_226 | DR97_231 | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | Type vi secretion system protein impb; Uncharacterized protein | 0.840 |
DR97_226 | DR97_4777 | DR97_226 | DR97_4777 | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | UDP-glucose/GDP-mannose dehydrogenase-like protein; NDP-sugDHase: nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family | 0.889 |
DR97_226 | DR97_510 | DR97_226 | DR97_510 | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | annotation not available | 0.952 |
DR97_226 | DR97_6061 | DR97_226 | DR97_6061 | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | 0.814 |
DR97_226 | clpV1 | DR97_226 | DR97_3047 | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | Type vi secretion atpase, clpv1 family; Required for secretion of hcp1 probably by providing the energy source for its translocation | 0.810 |
DR97_226 | vgrG1a | DR97_226 | DR97_3048 | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | Rhs element vgr family protein; Part of the H1 type VI secretion system (H1-T6SS) specialized secretion system, which delivers several virulence factors in both prokaryotic and eukaryotic cells during infection Forms the spike at the tip of the elongating tube formed by haemolysin co-regulated protein 1/Hcp1 . Allows the delivery of the Tse6 toxin to target cells where it exerts its toxicity | 0.890 |
DR97_226 | vgrG2a | DR97_226 | DR97_511 | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | Part of the H2 type VI secretion system (H2-T6SS) specialized secretion system, which delivers several virulence factors in both prokaryotic and eukaryotic cells during infection . May form the spike at the tip of the elongating tube formed by haemolysin co-regulated protein 2a/Hcp2a. In turn, may allow the delivery of the Tle4 antibacterial toxin to target cells where it exerts its toxicity (Probable). Promotes also the release of VgrG2b toxin to the host cell | 0.563 |
DR97_226 | wbgU | DR97_226 | DR97_4778 | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | annotation not available | 0.925 |
DR97_230 | DR97_223 | DR97_230 | DR97_223 | Type vi secretion system protein impc; Type VI secretion protein, EvpB/ family | annotation not available | 0.863 |
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