DR97_5100 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

DR97_5100

annotation not available (263 aa)

Predicted Functional Partners:

gacS

0.619

DR97_401

0.611

acdh-6

0.605

bvgS

0.604

DR97_4892

0.598

DR97_3759

0.590

fadA7

0.568

Acadl1

0.563

DR97_2335

0.550

DR97_2375

0.542

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Acadl1	DR97_401	DR97_1613	DR97_401	Long-chain specific acyl-CoA dehydrogenase, mitochondrial; acyl-CoA dehydrogenase, N-terminal domain protein	acyl-CoA dehydrogenase, N-terminal domain protein	0.651
Acadl1	DR97_5100	DR97_1613	DR97_5100	Long-chain specific acyl-CoA dehydrogenase, mitochondrial; acyl-CoA dehydrogenase, N-terminal domain protein	annotation not available	0.563
Acadl1	fadA7	DR97_1613	DR97_150	Long-chain specific acyl-CoA dehydrogenase, mitochondrial; acyl-CoA dehydrogenase, N-terminal domain protein	Putative acyltransferase Rv0859; acCoA-C-Actrans- acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase family	0.852
DR97_2335	DR97_3759	DR97_2335	DR97_3759	annotation not available	annotation not available	0.800
DR97_2335	DR97_4892	DR97_2335	DR97_4892	annotation not available	annotation not available	0.763
DR97_2335	DR97_5100	DR97_2335	DR97_5100	annotation not available	annotation not available	0.550
DR97_2335	bvgS	DR97_2335	DR97_3920	annotation not available	annotation not available	0.807
DR97_2335	gacS	DR97_2335	DR97_1011	annotation not available	annotation not available	0.800
DR97_2375	DR97_5100	DR97_2375	DR97_5100	acyl-CoA dehydrogenase, N-terminal domain protein	annotation not available	0.542
DR97_2375	fadA7	DR97_2375	DR97_150	acyl-CoA dehydrogenase, N-terminal domain protein	Putative acyltransferase Rv0859; acCoA-C-Actrans- acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase family	0.919
DR97_3759	DR97_2335	DR97_3759	DR97_2335	annotation not available	annotation not available	0.800
DR97_3759	DR97_4892	DR97_3759	DR97_4892	annotation not available	annotation not available	0.812
DR97_3759	DR97_5100	DR97_3759	DR97_5100	annotation not available	annotation not available	0.590
DR97_3759	bvgS	DR97_3759	DR97_3920	annotation not available	annotation not available	0.795
DR97_3759	gacS	DR97_3759	DR97_1011	annotation not available	annotation not available	0.810
DR97_401	Acadl1	DR97_401	DR97_1613	acyl-CoA dehydrogenase, N-terminal domain protein	Long-chain specific acyl-CoA dehydrogenase, mitochondrial; acyl-CoA dehydrogenase, N-terminal domain protein	0.651
DR97_401	DR97_5100	DR97_401	DR97_5100	acyl-CoA dehydrogenase, N-terminal domain protein	annotation not available	0.611
DR97_401	fadA7	DR97_401	DR97_150	acyl-CoA dehydrogenase, N-terminal domain protein	Putative acyltransferase Rv0859; acCoA-C-Actrans- acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase family	0.766
DR97_4892	DR97_2335	DR97_4892	DR97_2335	annotation not available	annotation not available	0.763
DR97_4892	DR97_3759	DR97_4892	DR97_3759	annotation not available	annotation not available	0.812

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