STRINGSTRING
emrB_4 protein (Pseudomonas aeruginosa) - STRING interaction network
"emrB_4" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrB_4annotation not available (530 aa)    
Predicted Functional Partners:
DR97_5105
Secretion protein; RND_mfp- efflux transporter, RND family, MFP subunit (354 aa)
   
  0.965
DR97_5104
Uncharacterized protein; outer_NodT- efflux transporter, outer membrane factor (OMF) lipo, NodT family protein (479 aa)
 
   
  0.920
marC
annotation not available (233 aa)
           
  0.854
DR97_5103
annotation not available (323 aa)
   
      0.751
trpR
annotation not available (310 aa)
 
      0.690
DR97_697
Putative multidrug resistance efflux pump; RND_mfp- efflux transporter, RND family, MFP subunit (383 aa)
   
  0.655
mdr
Uncharacterized protein; RND_mfp- efflux transporter, RND family, MFP subunit (344 aa)
   
  0.598
teaD
annotation not available (148 aa)
 
 
      0.550
DR97_5102
annotation not available (256 aa)
              0.512
DR97_478
annotation not available (513 aa)
   
          0.494
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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