cpg2 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

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protein homology

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[Homology]

Score

cpg2

annotation not available (412 aa)

Predicted Functional Partners:

DR97_5001

0.862

dapE

0.854

ydjA_2

0.727

drgA

0.665

DR97_5161

0.645

argA

0.528

pctC_5

0.490

pepA

0.473

DR97_5163

0.433

DR97_5162

0.433

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_5001	cpg2	DR97_5001	DR97_5160	annotation not available	annotation not available	0.862
DR97_5001	dapE	DR97_5001	DR97_772	annotation not available	Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily	0.623
DR97_5001	pepA	DR97_5001	DR97_4035	annotation not available	Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides; Belongs to the peptidase M17 family	0.878
DR97_5161	DR97_5162	DR97_5161	DR97_5162	annotation not available	annotation not available	0.553
DR97_5161	DR97_5163	DR97_5161	DR97_5163	annotation not available	DUF2975 domain-containing protein	0.553
DR97_5161	cpg2	DR97_5161	DR97_5160	annotation not available	annotation not available	0.645
DR97_5162	DR97_5161	DR97_5162	DR97_5161	annotation not available	annotation not available	0.553
DR97_5162	DR97_5163	DR97_5162	DR97_5163	annotation not available	DUF2975 domain-containing protein	0.949
DR97_5162	cpg2	DR97_5162	DR97_5160	annotation not available	annotation not available	0.433
DR97_5163	DR97_5161	DR97_5163	DR97_5161	DUF2975 domain-containing protein	annotation not available	0.553
DR97_5163	DR97_5162	DR97_5163	DR97_5162	DUF2975 domain-containing protein	annotation not available	0.949
DR97_5163	cpg2	DR97_5163	DR97_5160	DUF2975 domain-containing protein	annotation not available	0.433
argA	cpg2	DR97_2573	DR97_5160	N-Ac-Glu-synth- amino-acid N-acetyltransferase	annotation not available	0.528
argA	dapE	DR97_2573	DR97_772	N-Ac-Glu-synth- amino-acid N-acetyltransferase	Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily	0.745
cpg2	DR97_5001	DR97_5160	DR97_5001	annotation not available	annotation not available	0.862
cpg2	DR97_5161	DR97_5160	DR97_5161	annotation not available	annotation not available	0.645
cpg2	DR97_5162	DR97_5160	DR97_5162	annotation not available	annotation not available	0.433
cpg2	DR97_5163	DR97_5160	DR97_5163	annotation not available	DUF2975 domain-containing protein	0.433
cpg2	argA	DR97_5160	DR97_2573	annotation not available	N-Ac-Glu-synth- amino-acid N-acetyltransferase	0.528
cpg2	dapE	DR97_5160	DR97_772	annotation not available	Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily	0.854

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