STRINGSTRING
eco protein (Pseudomonas aeruginosa) - STRING interaction network
"eco" - Ecotin in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecoEcotin; General inhibitor of family S1 serine proteases (156 aa)    
Predicted Functional Partners:
tldD
annotation not available (480 aa)
           
  0.612
DR97_4985
Proteophosphoglycan (189 aa)
           
  0.579
allR
annotation not available (266 aa)
           
  0.438
pys1
Pyocin-S1; Causes breakdown of chromosomal DNA as well as complete inhibition of lipid synthesis in sensitive cells (618 aa)
   
          0.419
DR97_5186
Uncharacterized protein; Dyp_perox_fam- Dyp-type peroxidase family protein (293 aa)
   
          0.402
DR97_5200
Uncharacterized protein (65 aa)
 
          0.402
DR97_5199
DUF2789 domain-containing protein (76 aa)
              0.400
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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