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DR97_5274 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_5274" - vgr_GE: Rhs element Vgr family protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_5274vgr_GE- Rhs element Vgr family protein (689 aa)    
Predicted Functional Partners:
rhs
Uncharacterized protein; Rhs_assc_core- RHS repeat-associated core domain protein (1317 aa)
   
  0.896
DR97_3035
Uncharacterized protein; type_VI_ompA- type VI secretion system OmpA/MotB family protein (449 aa)
 
   
  0.813
DR97_3036
Type VI secretion system-associated protein (444 aa)
 
   
  0.810
DR97_3045
Uncharacterized protein (619 aa)
 
   
  0.808
DR97_3046
Uncharacterized protein (348 aa)
 
   
  0.807
DR97_3034
annotation not available (1176 aa)
 
     
  0.804
DR97_3040
Type VI secretion system-associated protein (172 aa)
 
   
  0.803
DR97_3038
annotation not available (493 aa)
 
   
  0.802
DR97_3044
annotation not available (169 aa)
 
   
  0.802
DR97_3041
Type VI secretion protein, EvpB/ family (498 aa)
 
     
  0.801
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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