qor3 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

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gene co-occurrence

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textmining

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protein homology

Your Input:

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[Homology]

Score

qor3

annotation not available (324 aa)

Predicted Functional Partners:

DR97_5279

0.798

DR97_920

0.759

ysgA

0.567

apbE

0.550

DR97_5007

0.549

DR97_5281

0.503

nqrC

0.481

rnfD

0.462

rnfG

0.462

fdh

0.460

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_5007	qor3	DR97_5007	DR97_5280	annotation not available	annotation not available	0.549
DR97_5279	DR97_5281	DR97_5279	DR97_5281	annotation not available	annotation not available	0.515
DR97_5279	qor3	DR97_5279	DR97_5280	annotation not available	annotation not available	0.798
DR97_5279	ysgA	DR97_5279	DR97_5278	annotation not available	annotation not available	0.482
DR97_5281	DR97_5279	DR97_5281	DR97_5279	annotation not available	annotation not available	0.515
DR97_5281	qor3	DR97_5281	DR97_5280	annotation not available	annotation not available	0.503
DR97_920	qor3	DR97_920	DR97_5280	annotation not available	annotation not available	0.759
apbE	nqrC	DR97_4945	DR97_4941	FAD-protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein; Belongs to the ApbE family	Na(+)-translocating NADH-quinone reductase subunit C; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	0.873
apbE	qor3	DR97_4945	DR97_5280	FAD-protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein; Belongs to the ApbE family	annotation not available	0.550
apbE	rnfD	DR97_4945	DR97_4432	FAD-protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein; Belongs to the ApbE family	Electron transport complex subunit D; Part of a membrane complex involved in electron transport	0.967
apbE	rnfG	DR97_4945	DR97_4431	FAD-protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein; Belongs to the ApbE family	Electron transport complex subunit G; Part of a membrane complex involved in electron transport	0.949
fdh	qor3	DR97_6268	DR97_5280	annotation not available	annotation not available	0.460
nqrC	apbE	DR97_4941	DR97_4945	Na(+)-translocating NADH-quinone reductase subunit C; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	FAD-protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein; Belongs to the ApbE family	0.873
nqrC	qor3	DR97_4941	DR97_5280	Na(+)-translocating NADH-quinone reductase subunit C; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	annotation not available	0.481
nqrC	rnfD	DR97_4941	DR97_4432	Na(+)-translocating NADH-quinone reductase subunit C; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	Electron transport complex subunit D; Part of a membrane complex involved in electron transport	0.926
nqrC	rnfG	DR97_4941	DR97_4431	Na(+)-translocating NADH-quinone reductase subunit C; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	Electron transport complex subunit G; Part of a membrane complex involved in electron transport	0.878
qor3	DR97_5007	DR97_5280	DR97_5007	annotation not available	annotation not available	0.549
qor3	DR97_5279	DR97_5280	DR97_5279	annotation not available	annotation not available	0.798
qor3	DR97_5281	DR97_5280	DR97_5281	annotation not available	annotation not available	0.503
qor3	DR97_920	DR97_5280	DR97_920	annotation not available	annotation not available	0.759

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