Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_5289 | HplR | DR97_5289 | DR97_5283 | annotation not available | annotation not available | 0.712 |
DR97_5289 | HplS | DR97_5289 | DR97_5284 | annotation not available | annotation not available | 0.713 |
DR97_5289 | HplT | DR97_5289 | DR97_5285 | annotation not available | typeII_sec_gspG: type II secretion system protein G | 0.888 |
DR97_5289 | HplU | DR97_5289 | DR97_5286 | annotation not available | General secretion pathway protein g; Type II secretion system protein; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | 0.855 |
DR97_5289 | HplV | DR97_5289 | DR97_5287 | annotation not available | General secretion pathway protein i; Type II secretion system protein; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | 0.857 |
DR97_5289 | HplW | DR97_5289 | DR97_5288 | annotation not available | annotation not available | 0.889 |
DR97_5289 | HxcW | DR97_5289 | DR97_1442 | annotation not available | Putative type ii secretion system protein; Uncharacterized protein; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | 0.479 |
DR97_5289 | Wzm | DR97_5289 | DR97_5282 | annotation not available | annotation not available | 0.680 |
DR97_5289 | gspJ | DR97_5289 | DR97_4835 | annotation not available | Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for the translocation of a variety of enzymes across the outer membrane | 0.479 |
HplR | DR97_5289 | DR97_5283 | DR97_5289 | annotation not available | annotation not available | 0.712 |
HplR | HplS | DR97_5283 | DR97_5284 | annotation not available | annotation not available | 0.988 |
HplR | HplT | DR97_5283 | DR97_5285 | annotation not available | typeII_sec_gspG: type II secretion system protein G | 0.960 |
HplR | HplU | DR97_5283 | DR97_5286 | annotation not available | General secretion pathway protein g; Type II secretion system protein; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | 0.679 |
HplR | HplV | DR97_5283 | DR97_5287 | annotation not available | General secretion pathway protein i; Type II secretion system protein; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | 0.699 |
HplR | HplW | DR97_5283 | DR97_5288 | annotation not available | annotation not available | 0.877 |
HplR | HxcW | DR97_5283 | DR97_1442 | annotation not available | Putative type ii secretion system protein; Uncharacterized protein; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | 0.930 |
HplR | Wzm | DR97_5283 | DR97_5282 | annotation not available | annotation not available | 0.854 |
HplR | gspJ | DR97_5283 | DR97_4835 | annotation not available | Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for the translocation of a variety of enzymes across the outer membrane | 0.624 |
HplS | DR97_5289 | DR97_5284 | DR97_5289 | annotation not available | annotation not available | 0.713 |
HplS | HplR | DR97_5284 | DR97_5283 | annotation not available | annotation not available | 0.988 |
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