Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2918 | eddA | DR97_2918 | DR97_3956 | Type i gtp cyclohydrolase fole2 family protein; Converts GTP to 7,8-dihydroneopterin triphosphate | annotation not available | 0.900 |
DR97_2918 | folE1 | DR97_2918 | DR97_4484 | Type i gtp cyclohydrolase fole2 family protein; Converts GTP to 7,8-dihydroneopterin triphosphate | Gtp cyclohydrolase ia; folE: GTP cyclohydrolase I | 0.817 |
DR97_2918 | folE2 | DR97_2918 | DR97_214 | Type i gtp cyclohydrolase fole2 family protein; Converts GTP to 7,8-dihydroneopterin triphosphate | Gtp cyclohydrolase ia; folE: GTP cyclohydrolase I | 0.817 |
DR97_2918 | folX | DR97_2918 | DR97_4483 | Type i gtp cyclohydrolase fole2 family protein; Converts GTP to 7,8-dihydroneopterin triphosphate | annotation not available | 0.903 |
DR97_2918 | phoA | DR97_2918 | DR97_4634 | Type i gtp cyclohydrolase fole2 family protein; Converts GTP to 7,8-dihydroneopterin triphosphate | Alkaline phosphatase h; Has only phosphomonoesterase activity | 0.900 |
DR97_2918 | queD | DR97_2918 | DR97_5294 | Type i gtp cyclohydrolase fole2 family protein; Converts GTP to 7,8-dihydroneopterin triphosphate | 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase; 6-carboxy-5,6,7,8-tetrahydropterin synthase; queuosine_QueD: queuosine biosynthesis protein QueD | 0.931 |
eddA | DR97_2918 | DR97_3956 | DR97_2918 | annotation not available | Type i gtp cyclohydrolase fole2 family protein; Converts GTP to 7,8-dihydroneopterin triphosphate | 0.900 |
eddA | folE1 | DR97_3956 | DR97_4484 | annotation not available | Gtp cyclohydrolase ia; folE: GTP cyclohydrolase I | 0.900 |
eddA | folE2 | DR97_3956 | DR97_214 | annotation not available | Gtp cyclohydrolase ia; folE: GTP cyclohydrolase I | 0.900 |
eddA | folX | DR97_3956 | DR97_4483 | annotation not available | annotation not available | 0.912 |
eddA | phoA | DR97_3956 | DR97_4634 | annotation not available | Alkaline phosphatase h; Has only phosphomonoesterase activity | 0.955 |
eddA | queD | DR97_3956 | DR97_5294 | annotation not available | 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase; 6-carboxy-5,6,7,8-tetrahydropterin synthase; queuosine_QueD: queuosine biosynthesis protein QueD | 0.900 |
folE1 | DR97_2918 | DR97_4484 | DR97_2918 | Gtp cyclohydrolase ia; folE: GTP cyclohydrolase I | Type i gtp cyclohydrolase fole2 family protein; Converts GTP to 7,8-dihydroneopterin triphosphate | 0.817 |
folE1 | eddA | DR97_4484 | DR97_3956 | Gtp cyclohydrolase ia; folE: GTP cyclohydrolase I | annotation not available | 0.900 |
folE1 | folE2 | DR97_4484 | DR97_214 | Gtp cyclohydrolase ia; folE: GTP cyclohydrolase I | Gtp cyclohydrolase ia; folE: GTP cyclohydrolase I | 0.802 |
folE1 | folX | DR97_4484 | DR97_4483 | Gtp cyclohydrolase ia; folE: GTP cyclohydrolase I | annotation not available | 0.995 |
folE1 | phoA | DR97_4484 | DR97_4634 | Gtp cyclohydrolase ia; folE: GTP cyclohydrolase I | Alkaline phosphatase h; Has only phosphomonoesterase activity | 0.900 |
folE1 | queA | DR97_4484 | DR97_4045 | Gtp cyclohydrolase ia; folE: GTP cyclohydrolase I | S-adenosylmethionine:trna ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) | 0.520 |
folE1 | queC | DR97_4484 | DR97_961 | Gtp cyclohydrolase ia; folE: GTP cyclohydrolase I | Queuosine biosynthesis protein quec; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) | 0.621 |
folE1 | queD | DR97_4484 | DR97_5294 | Gtp cyclohydrolase ia; folE: GTP cyclohydrolase I | 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase; 6-carboxy-5,6,7,8-tetrahydropterin synthase; queuosine_QueD: queuosine biosynthesis protein QueD | 0.983 |
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