Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_5353 | DR97_5944 | DR97_5353 | DR97_5944 | annotation not available | annotation not available | 0.730 |
DR97_5353 | aroA | DR97_5353 | DR97_4772 | annotation not available | annotation not available | 0.780 |
DR97_5353 | dsrH | DR97_5353 | DR97_5355 | annotation not available | Trna 2-thiouridine synthesizing protein b; sulf_tusB_dsrH: sulfur relay protein TusB/DsrH | 0.900 |
DR97_5353 | phzE1 | DR97_5353 | DR97_3697 | annotation not available | annotation not available | 0.730 |
DR97_5353 | trpA | DR97_5353 | DR97_2989 | annotation not available | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate | 0.752 |
DR97_5353 | trpC | DR97_5353 | DR97_3604 | annotation not available | indole-3-glycerol phosphate synthase family protein; Belongs to the TrpC family | 0.778 |
DR97_5353 | trpF | DR97_5353 | DR97_4820 | annotation not available | N-(5'phosphoribosyl)anthranilate (PRA) isomerase family protein; Belongs to the TrpF family | 0.824 |
DR97_5353 | tusC | DR97_5353 | DR97_5356 | annotation not available | Trna 2-thiouridine synthesizing protein c; Could be part of a sulfur-relay system | 0.891 |
DR97_5353 | tusD | DR97_5353 | DR97_5357 | annotation not available | Trna 2-thiouridine synthesizing protein d; Could be part of a sulfur-relay system | 0.891 |
DR97_5353 | tusE | DR97_5353 | DR97_5354 | annotation not available | Sulfur relay , tuse/dsrc/dsvc family protein; Part of a sulfur-relay system | 0.891 |
DR97_5944 | DR97_5353 | DR97_5944 | DR97_5353 | annotation not available | annotation not available | 0.730 |
DR97_5944 | aroA | DR97_5944 | DR97_4772 | annotation not available | annotation not available | 0.875 |
DR97_5944 | phzE1 | DR97_5944 | DR97_3697 | annotation not available | annotation not available | 0.999 |
DR97_5944 | trpA | DR97_5944 | DR97_2989 | annotation not available | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate | 0.974 |
DR97_5944 | trpC | DR97_5944 | DR97_3604 | annotation not available | indole-3-glycerol phosphate synthase family protein; Belongs to the TrpC family | 0.985 |
DR97_5944 | trpF | DR97_5944 | DR97_4820 | annotation not available | N-(5'phosphoribosyl)anthranilate (PRA) isomerase family protein; Belongs to the TrpF family | 0.982 |
aroA | DR97_5353 | DR97_4772 | DR97_5353 | annotation not available | annotation not available | 0.780 |
aroA | DR97_5944 | DR97_4772 | DR97_5944 | annotation not available | annotation not available | 0.875 |
aroA | phzE1 | DR97_4772 | DR97_3697 | annotation not available | annotation not available | 0.875 |
aroA | trpA | DR97_4772 | DR97_2989 | annotation not available | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate | 0.880 |
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