Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3789 | DR97_4600 | DR97_3789 | DR97_4600 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | Putative non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein | 0.593 |
DR97_3789 | DR97_5440 | DR97_3789 | DR97_5440 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | annotation not available | 0.887 |
DR97_3789 | DR97_5444 | DR97_3789 | DR97_5444 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | annotation not available | 0.792 |
DR97_3789 | pchF | DR97_3789 | DR97_3686 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | Pyochelin synthetase; AA-adenyl-dom: amino acid adenylation domain protein | 0.610 |
DR97_3789 | rifR | DR97_3789 | DR97_3682 | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | annotation not available | 0.800 |
DR97_4600 | DR97_3789 | DR97_4600 | DR97_3789 | Putative non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | 0.593 |
DR97_4600 | DR97_5440 | DR97_4600 | DR97_5440 | Putative non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein | annotation not available | 0.875 |
DR97_4600 | DR97_5444 | DR97_4600 | DR97_5444 | Putative non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein | annotation not available | 0.863 |
DR97_4600 | pchF | DR97_4600 | DR97_3686 | Putative non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein | Pyochelin synthetase; AA-adenyl-dom: amino acid adenylation domain protein | 0.437 |
DR97_4600 | rifR | DR97_4600 | DR97_3682 | Putative non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein | annotation not available | 0.865 |
DR97_5438 | DR97_5440 | DR97_5438 | DR97_5440 | annotation not available | annotation not available | 0.960 |
DR97_5438 | DR97_5441 | DR97_5438 | DR97_5441 | annotation not available | annotation not available | 0.963 |
DR97_5438 | DR97_5442 | DR97_5438 | DR97_5442 | annotation not available | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein | 0.933 |
DR97_5438 | DR97_5443 | DR97_5438 | DR97_5443 | annotation not available | Putative acyl-CoA synthetase; AA-adenyl-dom: amino acid adenylation domain protein; Belongs to the ATP-dependent AMP-binding enzyme family | 0.939 |
DR97_5438 | DR97_5444 | DR97_5438 | DR97_5444 | annotation not available | annotation not available | 0.933 |
DR97_5440 | DR97_3789 | DR97_5440 | DR97_3789 | annotation not available | Putative nonribosomal peptide synthetase; Thioester-redct: thioester reductase domain protein | 0.887 |
DR97_5440 | DR97_4600 | DR97_5440 | DR97_4600 | annotation not available | Putative non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein | 0.875 |
DR97_5440 | DR97_5438 | DR97_5440 | DR97_5438 | annotation not available | annotation not available | 0.960 |
DR97_5440 | DR97_5441 | DR97_5440 | DR97_5441 | annotation not available | annotation not available | 0.972 |
DR97_5440 | DR97_5442 | DR97_5440 | DR97_5442 | annotation not available | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein | 0.949 |
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