STRINGSTRING
DR97_5456 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_5456" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_5456annotation not available (404 aa)    
Predicted Functional Partners:
DR97_5455
annotation not available (884 aa)
              0.831
vqsM
annotation not available (342 aa)
   
        0.597
DR97_4581
annotation not available (571 aa)
   
   
  0.538
nreC
annotation not available (268 aa)
              0.536
DR97_2
annotation not available (340 aa)
     
        0.521
phaZ
PHA_depoly_arom- poly(3-hydroxyalkanoate) depolymerase (285 aa)
     
      0.514
nuh
annotation not available (350 aa)
   
   
  0.463
DR97_4580
annotation not available (101 aa)
     
        0.443
plcB
annotation not available (328 aa)
     
        0.440
algB_2
annotation not available (275 aa)
     
        0.438
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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