Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR97_539 | ccmA | DR97_539 | DR97_548 | annotation not available | Heme abc exporter, atp-binding protein ccma; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system | 0.493 |
| DR97_539 | ccmB | DR97_539 | DR97_547 | annotation not available | Heme exporter protein ccmb; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes | 0.493 |
| DR97_539 | ccmC | DR97_539 | DR97_546 | annotation not available | Heme exporter ccmc family protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes | 0.766 |
| DR97_539 | ccmD | DR97_539 | DR97_545 | annotation not available | Putative heme exporter protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes | 0.812 |
| DR97_539 | ccmE | DR97_539 | DR97_544 | annotation not available | Cytochrome c-type biogenesis protein ccme; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH | 0.765 |
| DR97_539 | ccmF | DR97_539 | DR97_543 | annotation not available | Cytochrome c-type biogenesis protein ccmf; Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase (By similarity) | 0.766 |
| DR97_539 | ccmH | DR97_539 | DR97_541 | annotation not available | Cytochrome c-type biogenesis protein ccmh; Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase (By similarity) | 0.795 |
| DR97_539 | ccmI | DR97_539 | DR97_540 | annotation not available | Cytochrome c-type biogenesis protein ccmh; Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase (By similarity) | 0.807 |
| DR97_539 | dsbE | DR97_539 | DR97_542 | annotation not available | Cytochrome c biogenesis protein ccmg, thiol:disulfide interchange protein dsbe; Involved in disulfide bond formation. Catalyzes a late, reductive step in the assembly of periplasmic c-type cytochromes, probably the reduction of disulfide bonds of the apocytochrome c to allow covalent linkage with the heme. Possible subunit of a heme lyase (By similarity) | 0.791 |
| cc4 | ccmC | DR97_2868 | DR97_546 | Cytochrome c4 precursor; Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems | Heme exporter ccmc family protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes | 0.749 |
| cc4 | ccmF | DR97_2868 | DR97_543 | Cytochrome c4 precursor; Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems | Cytochrome c-type biogenesis protein ccmf; Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase (By similarity) | 0.419 |
| cc4 | ccmI | DR97_2868 | DR97_540 | Cytochrome c4 precursor; Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems | Cytochrome c-type biogenesis protein ccmh; Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase (By similarity) | 0.465 |
| ccmA | DR97_539 | DR97_548 | DR97_539 | Heme abc exporter, atp-binding protein ccma; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system | annotation not available | 0.493 |
| ccmA | ccmB | DR97_548 | DR97_547 | Heme abc exporter, atp-binding protein ccma; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system | Heme exporter protein ccmb; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes | 0.999 |
| ccmA | ccmC | DR97_548 | DR97_546 | Heme abc exporter, atp-binding protein ccma; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system | Heme exporter ccmc family protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes | 0.997 |
| ccmA | ccmD | DR97_548 | DR97_545 | Heme abc exporter, atp-binding protein ccma; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system | Putative heme exporter protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes | 0.896 |
| ccmA | ccmE | DR97_548 | DR97_544 | Heme abc exporter, atp-binding protein ccma; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system | Cytochrome c-type biogenesis protein ccme; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH | 0.960 |
| ccmA | ccmF | DR97_548 | DR97_543 | Heme abc exporter, atp-binding protein ccma; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system | Cytochrome c-type biogenesis protein ccmf; Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase (By similarity) | 0.976 |
| ccmA | ccmH | DR97_548 | DR97_541 | Heme abc exporter, atp-binding protein ccma; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system | Cytochrome c-type biogenesis protein ccmh; Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase (By similarity) | 0.969 |
| ccmA | ccmI | DR97_548 | DR97_540 | Heme abc exporter, atp-binding protein ccma; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system | Cytochrome c-type biogenesis protein ccmh; Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase (By similarity) | 0.939 |
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