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gap5 protein (Pseudomonas aeruginosa) - STRING interaction network
"gap5" - GAPDH-II_archae: glyceraldehyde-3-phosphate dehydrogenase, type II in Pseudomonas aeruginosa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gap5GAPDH-II_archae- glyceraldehyde-3-phosphate dehydrogenase, type II (351 aa)    
Predicted Functional Partners:
pgk
annotation not available (387 aa)
   
 
  0.939
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family (251 aa)
   
 
  0.892
eno
Enolase; Eno- phosphopyruvate hydratase (429 aa)
 
 
  0.888
DR97_5490
annotation not available (420 aa)
 
          0.874
DR97_5496
Uncharacterized protein; ribP_PPkin- ribose-phosphate diphosphokinase family protein; Belongs to the ribose-phosphate pyrophosphokinase family (299 aa)
 
   
  0.845
fba
fruBisAldo_II_B- fructose-bisphosphate aldolase, class II, Calvin cycle subtype (354 aa)
   
 
  0.816
DR97_5492
annotation not available (510 aa)
 
 
      0.814
pgi
annotation not available (554 aa)
   
   
  0.774
DR97_5497
annotation not available (517 aa)
 
 
 
  0.774
DR97_5493
annotation not available (343 aa)
 
   
  0.771
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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