Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cobB1 | cobB2 | DR97_809 | DR97_737 | Cobalamin biosynthetic protein; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form | NAD-dependent protein deacetylase which modulates the activities of several proteins which are inactive in their acetylated form | 0.843 |
| cobB1 | nadE | DR97_809 | DR97_2271 | Cobalamin biosynthetic protein; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source | 0.915 |
| cobB1 | nadK | DR97_809 | DR97_4848 | Cobalamin biosynthetic protein; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form | Inorganic polyphosphate/atp-nad kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP | 0.921 |
| cobB1 | nudC | DR97_809 | DR97_55 | Cobalamin biosynthetic protein; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form | annotation not available | 0.907 |
| cobB1 | pntAB | DR97_809 | DR97_3152 | Cobalamin biosynthetic protein; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form | NAD(P) transhydrogenase subunit alpha | 0.904 |
| cobB2 | cobB1 | DR97_737 | DR97_809 | NAD-dependent protein deacetylase which modulates the activities of several proteins which are inactive in their acetylated form | Cobalamin biosynthetic protein; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form | 0.843 |
| cobB2 | nadE | DR97_737 | DR97_2271 | NAD-dependent protein deacetylase which modulates the activities of several proteins which are inactive in their acetylated form | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source | 0.915 |
| cobB2 | nadK | DR97_737 | DR97_4848 | NAD-dependent protein deacetylase which modulates the activities of several proteins which are inactive in their acetylated form | Inorganic polyphosphate/atp-nad kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP | 0.921 |
| cobB2 | nudC | DR97_737 | DR97_55 | NAD-dependent protein deacetylase which modulates the activities of several proteins which are inactive in their acetylated form | annotation not available | 0.907 |
| cobB2 | pntAB | DR97_737 | DR97_3152 | NAD-dependent protein deacetylase which modulates the activities of several proteins which are inactive in their acetylated form | NAD(P) transhydrogenase subunit alpha | 0.904 |
| fimL | nudC | DR97_57 | DR97_55 | annotation not available | annotation not available | 0.936 |
| nadC | nadE | DR97_1703 | DR97_2271 | Nicotinate-nucleotide pyrophosphorylase (carboxylating); Involved in the catabolism of quinolinic acid (QA) | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source | 0.591 |
| nadC | nadK | DR97_1703 | DR97_4848 | Nicotinate-nucleotide pyrophosphorylase (carboxylating); Involved in the catabolism of quinolinic acid (QA) | Inorganic polyphosphate/atp-nad kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP | 0.557 |
| nadC | nudC | DR97_1703 | DR97_55 | Nicotinate-nucleotide pyrophosphorylase (carboxylating); Involved in the catabolism of quinolinic acid (QA) | annotation not available | 0.907 |
| nadC | pncB1 | DR97_1703 | DR97_2270 | Nicotinate-nucleotide pyrophosphorylase (carboxylating); Involved in the catabolism of quinolinic acid (QA) | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP | 0.977 |
| nadC | pncB2 | DR97_1703 | DR97_1553 | Nicotinate-nucleotide pyrophosphorylase (carboxylating); Involved in the catabolism of quinolinic acid (QA) | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP | 0.984 |
| nadC | surE | DR97_1703 | DR97_4314 | Nicotinate-nucleotide pyrophosphorylase (carboxylating); Involved in the catabolism of quinolinic acid (QA) | Stationary phase survival protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates | 0.902 |
| nadE | cobB1 | DR97_2271 | DR97_809 | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source | Cobalamin biosynthetic protein; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form | 0.915 |
| nadE | cobB2 | DR97_2271 | DR97_737 | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source | NAD-dependent protein deacetylase which modulates the activities of several proteins which are inactive in their acetylated form | 0.915 |
| nadE | nadC | DR97_2271 | DR97_1703 | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source | Nicotinate-nucleotide pyrophosphorylase (carboxylating); Involved in the catabolism of quinolinic acid (QA) | 0.591 |
page 1 of 4
