Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DR97_5513 | DR97_5514 | Relaxase; ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class | Hypothetical protein; Integrase | 0.753 |
DR97_5513 | DR97_5515 | Relaxase; ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class | annotation not available | 0.565 |
DR97_5513 | DR97_5516 | Relaxase; ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class | Conserved hypothetical protein | 0.814 |
DR97_5513 | DR97_5518 | Relaxase; ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class | annotation not available | 0.747 |
DR97_5513 | DR97_5531 | Relaxase; ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class | Hypothetical protein; Uncharacterized protein | 0.776 |
DR97_5513 | DR97_5546 | Relaxase; ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class | annotation not available | 0.707 |
DR97_5513 | DR97_5563 | Relaxase; ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class | Conserved hypothetical protein | 0.699 |
DR97_5513 | DR97_5566 | Relaxase; ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class | Hypothetical protein; Uncharacterized protein ORF C93 | 0.652 |
DR97_5513 | DR97_5574 | Relaxase; ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class | Hypothetical protein; Uncharacterized protein ORF C103 | 0.926 |
DR97_5513 | DR97_5579 | Relaxase; ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class | Conserved hypothetical protein | 0.747 |
DR97_5514 | DR97_5513 | Hypothetical protein; Integrase | Relaxase; ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class | 0.753 |
DR97_5514 | DR97_5515 | Hypothetical protein; Integrase | annotation not available | 0.965 |
DR97_5514 | DR97_5516 | Hypothetical protein; Integrase | Conserved hypothetical protein | 0.909 |
DR97_5514 | DR97_5518 | Hypothetical protein; Integrase | annotation not available | 0.777 |
DR97_5514 | DR97_5531 | Hypothetical protein; Integrase | Hypothetical protein; Uncharacterized protein | 0.765 |
DR97_5514 | DR97_5546 | Hypothetical protein; Integrase | annotation not available | 0.786 |
DR97_5514 | DR97_5563 | Hypothetical protein; Integrase | Conserved hypothetical protein | 0.778 |
DR97_5514 | DR97_5566 | Hypothetical protein; Integrase | Hypothetical protein; Uncharacterized protein ORF C93 | 0.778 |
DR97_5514 | DR97_5574 | Hypothetical protein; Integrase | Hypothetical protein; Uncharacterized protein ORF C103 | 0.774 |
DR97_5514 | DR97_5579 | Hypothetical protein; Integrase | Conserved hypothetical protein | 0.775 |
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