STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_5525Conserved hypothetical protein (151 aa)    
Predicted Functional Partners:
DR97_5527
Hypothetical protein; Putative secreted protein
 
     0.967
DR97_5529
Hypothetical protein; Conjugative transfer region protein
 
     0.967
DR97_5524
Uncharacterized protein; Conjugative transfer ATPase, PFL_4706 family; traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family
 
     0.966
DR97_5526
Hypothetical protein; Uncharacterized protein
 
     0.966
DR97_5528
Putative exported protein; Uncharacterized protein
 
     0.966
DR97_5530
Conjugal transfer protein; Integrating conjugative element membrane protein, family
 
     0.966
DR97_5532
Hypothetical protein; Uncharacterized protein
 
     0.954
DR97_5531
Hypothetical protein; Uncharacterized protein
 
     0.937
DR97_5523
annotation not available
 
     0.856
DR97_5519
Integrating conjugative element protein, PFL_4711 family; conj_TIGR03755: integrating conjugative element protein, PFL_4711 family
 
     0.843
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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