DR97_5525 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

Your Input:

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[Homology]

Score

DR97_5525

Conserved hypothetical protein (151 aa)

Predicted Functional Partners:

DR97_5529

0.967

DR97_5527

0.967

DR97_5528

0.966

DR97_5526

0.966

DR97_5524

0.966

DR97_5530

0.966

DR97_5532

0.954

DR97_5531

0.937

DR97_5523

0.856

DR97_5520

0.843

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
DR97_5520	DR97_5523	annotation not available	annotation not available	0.525
DR97_5520	DR97_5524	annotation not available	Uncharacterized protein; Conjugative transfer ATPase, PFL_4706 family; traC_PFL_4706- conjugative transfer ATPase, PFL_4706 family	0.843
DR97_5520	DR97_5525	annotation not available	Conserved hypothetical protein	0.843
DR97_5520	DR97_5526	annotation not available	Uncharacterized protein	0.843
DR97_5520	DR97_5527	annotation not available	Putative secreted protein	0.846
DR97_5520	DR97_5528	annotation not available	Uncharacterized protein	0.875
DR97_5520	DR97_5529	annotation not available	Conjugative transfer region protein	0.839
DR97_5520	DR97_5530	annotation not available	Integrating conjugative element membrane protein, family	0.841
DR97_5520	DR97_5531	annotation not available	Uncharacterized protein	0.753
DR97_5520	DR97_5532	annotation not available	Uncharacterized protein	0.841
DR97_5523	DR97_5520	annotation not available	annotation not available	0.525
DR97_5523	DR97_5524	annotation not available	Uncharacterized protein; Conjugative transfer ATPase, PFL_4706 family; traC_PFL_4706- conjugative transfer ATPase, PFL_4706 family	0.842
DR97_5523	DR97_5525	annotation not available	Conserved hypothetical protein	0.856
DR97_5523	DR97_5526	annotation not available	Uncharacterized protein	0.886
DR97_5523	DR97_5527	annotation not available	Putative secreted protein	0.888
DR97_5523	DR97_5528	annotation not available	Uncharacterized protein	0.835
DR97_5523	DR97_5529	annotation not available	Conjugative transfer region protein	0.942
DR97_5523	DR97_5530	annotation not available	Integrating conjugative element membrane protein, family	0.941
DR97_5523	DR97_5531	annotation not available	Uncharacterized protein	0.942
DR97_5523	DR97_5532	annotation not available	Uncharacterized protein	0.938

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