Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DR97_5519 | DR97_5523 | Integrating conjugative element protein, PFL_4711 family; conj_TIGR03755: integrating conjugative element protein, PFL_4711 family | annotation not available | 0.708 |
DR97_5519 | DR97_5524 | Integrating conjugative element protein, PFL_4711 family; conj_TIGR03755: integrating conjugative element protein, PFL_4711 family | Uncharacterized protein; Conjugative transfer ATPase, PFL_4706 family; traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family | 0.861 |
DR97_5519 | DR97_5525 | Integrating conjugative element protein, PFL_4711 family; conj_TIGR03755: integrating conjugative element protein, PFL_4711 family | Conserved hypothetical protein | 0.843 |
DR97_5519 | DR97_5526 | Integrating conjugative element protein, PFL_4711 family; conj_TIGR03755: integrating conjugative element protein, PFL_4711 family | Hypothetical protein; Uncharacterized protein | 0.851 |
DR97_5519 | DR97_5527 | Integrating conjugative element protein, PFL_4711 family; conj_TIGR03755: integrating conjugative element protein, PFL_4711 family | Hypothetical protein; Putative secreted protein | 0.846 |
DR97_5519 | DR97_5528 | Integrating conjugative element protein, PFL_4711 family; conj_TIGR03755: integrating conjugative element protein, PFL_4711 family | Putative exported protein; Uncharacterized protein | 0.843 |
DR97_5519 | DR97_5529 | Integrating conjugative element protein, PFL_4711 family; conj_TIGR03755: integrating conjugative element protein, PFL_4711 family | Hypothetical protein; Conjugative transfer region protein | 0.842 |
DR97_5519 | DR97_5530 | Integrating conjugative element protein, PFL_4711 family; conj_TIGR03755: integrating conjugative element protein, PFL_4711 family | Conjugal transfer protein; Integrating conjugative element membrane protein, family | 0.843 |
DR97_5519 | DR97_5531 | Integrating conjugative element protein, PFL_4711 family; conj_TIGR03755: integrating conjugative element protein, PFL_4711 family | Hypothetical protein; Uncharacterized protein | 0.822 |
DR97_5519 | DR97_5532 | Integrating conjugative element protein, PFL_4711 family; conj_TIGR03755: integrating conjugative element protein, PFL_4711 family | Hypothetical protein; Uncharacterized protein | 0.834 |
DR97_5523 | DR97_5519 | annotation not available | Integrating conjugative element protein, PFL_4711 family; conj_TIGR03755: integrating conjugative element protein, PFL_4711 family | 0.708 |
DR97_5523 | DR97_5524 | annotation not available | Uncharacterized protein; Conjugative transfer ATPase, PFL_4706 family; traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family | 0.842 |
DR97_5523 | DR97_5525 | annotation not available | Conserved hypothetical protein | 0.856 |
DR97_5523 | DR97_5526 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.886 |
DR97_5523 | DR97_5527 | annotation not available | Hypothetical protein; Putative secreted protein | 0.888 |
DR97_5523 | DR97_5528 | annotation not available | Putative exported protein; Uncharacterized protein | 0.835 |
DR97_5523 | DR97_5529 | annotation not available | Hypothetical protein; Conjugative transfer region protein | 0.942 |
DR97_5523 | DR97_5530 | annotation not available | Conjugal transfer protein; Integrating conjugative element membrane protein, family | 0.941 |
DR97_5523 | DR97_5531 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.942 |
DR97_5523 | DR97_5532 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.938 |
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