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DR97_5540 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_5540" - recF/RecN/SMC N terminal domain protein in Pseudomonas aeruginosa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_5540recF/RecN/SMC N terminal domain protein (874 aa)    
Predicted Functional Partners:
DR97_5539
Uncharacterized protein (241 aa)
 
          0.939
DR97_5538
annotation not available (300 aa)
 
          0.916
DR97_5535
annotation not available (294 aa)
 
        0.839
DR97_5532
Uncharacterized protein (127 aa)
 
          0.781
DR97_5559
Conserved hypothetical protein (108 aa)
   
          0.745
sbcD
Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3’->5’ double strand exonuclease that can open hairpins. It also has a 5’ single-strand endonuclease activity (409 aa)
   
 
  0.743
DR97_5537
HORMA domain containing protein (166 aa)
              0.738
DR97_5536
Conserved hypothetical protein (156 aa)
              0.738
DR97_5546
annotation not available (214 aa)
   
          0.732
DR97_5523
annotation not available (255 aa)
 
          0.721
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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